Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1123 ATGCCAACGACACCGTTCTCGGACTCCGACGAGCTCCGTATGCCGCTGGTGGCGGTGGCAGCAAAGGAGGCGGAGACGGAGAAGCTTTGCATCGACGAGATGCTTCGAAAGTATTGCGGCGAGTTCGGAAAGTGGCAGTTGAGACACTTCATCTTCACAAGCCTCGCGTGGGCGCTGGAGGCCTTCCACACCATGGTCATGATCTTCGCCGACCGTGAGCCGGAGTGGCGATGTACCGCCACCACCTCCGCTGCCTGCGGAGTGGTTGGGAGCACCTGCGAAATCCGGCCGGATGACTGGGAGTGGATTGGTGGACGCGGCGGCGCCACCGTGTCAGAGTGGGGACTTGTTTGCGGCGACAAATTTAAAGTTGGGCTCGTCCAGTCCTTATTCTTTGCCGGATGTATGATTGGTGCTGGAATATTTGGTCACCTCTCAGATTCTTTTCTTGGAAGAAAAGGTTCACTGATGGTTGTTTGTGCCTTAAATGCCATTTTTGGTTGTCTCACAGCATTCTCGCCAAATTATTGGATCTACGTCATTTTCCGCCTCCTCACCGGCTTCAGCACCGGCGGTGTTGGCCTATGCGCATTTGTCCTTGCCACCGAGCCAATTGGCCCAACAAAACGTGGTATCGCCGGAATGTCCACTTTCTACTTTTTCTCCATCGGCATTGCAATCCTCTCCGCCGTTGCCTACATCTTCCAAACATGGCGTGCGCTTTACATTGCGTCCTCCATCCCCTCCATTCTCTTCGTCTTCCTCGTCATCCCTTTTCTCTCAGAGTCTCCAAGATGGTACCTCGTTCGTGGAAGAGTAACCGAAGCCATGAAGATCATGTCCAATATTGCTTCTACCAATGGAAAGCACCTCCCTAGTGGTGTTCTTCTTGCACTTGACGAAGAAACCGAAGTACAAGCAGAAGCAAAAACGGAAGCACTAACCTTGACCTATAAGAACAACAACAACAAGTCTTTGGAAAACAAAGATGCAGTTGGTGGTTCTATTGTTGACGTCCTTCGCTCTCCAGTCACTAGAATAAGGTTGATTCTAATGGTGGCAATCAACTTCTTTTGCTCTGTTGTGTACTATGGTCTGAGCTTGAACGTGGTAAATCTTGATACCAACCTTTACATGAACGTGGCGTTGAATGCAGTGGCAGAGATGCCGGCGTTTGGGATAACGGCGATTTTGTTGGACAAGTTTGGGAGGAAGCCGTTGGCAATAGGGACAATGTGGTTCAGCGGTTTGTTTTGTTTGTTAGGTAGTTTAATGGGTAATGTTGGAGTGTGGAAGTTAATTAGAATGGTGTGTGGTATTTTGGGGATATTTGGGATGGCCGGAACTTATAATTTATTGTTTATTTACACGGCGGAGTTGTTCCCTACGGTGGTCAGGAACGCAGCACTTGGGTGCGCCACGCAGGCGGTGCAAATGGGGGCAATATTGTCGCCGGTGGTGGTGGTTTTGGGCGGTTGGCTGCCGTTCGCGGTGTTTGCTGTGTGTGGAATAGTGGGTGGCATGTTTGCATTTTATTTGCCGGAAACTTTGAATCAGCCCTTATATGATACATTCTCTGGATTGGAAGCTGGGCTTGTTTGA 1602 0.5012 MPTTPFSDSDELRMPLVAVAAKEAETEKLCIDEMLRKYCGEFGKWQLRHFIFTSLAWALEAFHTMVMIFADREPEWRCTATTSAACGVVGSTCEIRPDDWEWIGGRGGATVSEWGLVCGDKFKVGLVQSLFFAGCMIGAGIFGHLSDSFLGRKGSLMVVCALNAIFGCLTAFSPNYWIYVIFRLLTGFSTGGVGLCAFVLATEPIGPTKRGIAGMSTFYFFSIGIAILSAVAYIFQTWRALYIASSIPSILFVFLVIPFLSESPRWYLVRGRVTEAMKIMSNIASTNGKHLPSGVLLALDEETEVQAEAKTEALTLTYKNNNNKSLENKDAVGGSIVDVLRSPVTRIRLILMVAINFFCSVVYYGLSLNVVNLDTNLYMNVALNAVAEMPAFGITAILLDKFGRKPLAIGTMWFSGLFCLLGSLMGNVGVWKLIRMVCGILGIFGMAGTYNLLFIYTAELFPTVVRNAALGCATQAVQMGAILSPVVVVLGGWLPFAVFAVCGIVGGMFAFYLPETLNQPLYDTFSGLEAGLV* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1123 533 Gene3D MFS general substrate transporter like domains 47 525 IPR036259 -
Ahy18g1123 533 ProSiteProfiles Major facilitator superfamily (MFS) profile. 49 518 IPR020846 GO:0022857
Ahy18g1123 533 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 31 530 - -
Ahy18g1123 533 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 31 530 - -
Ahy18g1123 533 ProSitePatterns Sugar transport proteins signature 2. 185 210 IPR005829 GO:0016021|GO:0022857|GO:0055085
Ahy18g1123 533 ProSitePatterns Sugar transport proteins signature 1. 395 411 IPR005829 GO:0016021|GO:0022857|GO:0055085
Ahy18g1123 533 SUPERFAMILY MFS general substrate transporter 120 521 IPR036259 -
Ahy18g1123 533 Pfam Sugar (and other) transporter 120 522 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1123 Ahy-Chr18 17384432 17389194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1123 1 529 Organic Solute Cotransporters AT3G20660 67.105 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1123 K08202 - gmx:100797665 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1123 18 17384432 17389194 Ahy18g1123 18 17384432 17389194 ECH
Ahy18g1123 18 17384432 17389194 Ahy8g1833 8 36749833 36754066 hybridization
Ahy18g1123 18 17384432 17389194 Ahy13g1750 13 27793696 27801266 PCT
Ahy13g1750 13 27793696 27801266 Ahy18g1123 18 17384432 17389194 PCT