Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1083 ATGGAGGAAGCACTTAATAAGATGGTGATGAAAGTTGATCCTTCTTCAACAACATACTGTGTTACTGGAGCCACTGGGTACATTGGTTCATACCTTGTAGAGATTCTTCTTCAAAGAGGCTACAAAGTTCATGCCACTCTCAGAGATCCTGAAAAATCACTACACCTAATGTCAGTGTGGGGTGGAGGTGACCGATTGAGATTGTTCAAAGCAGATTTGAATGAAGAAGGAAGCTTCGATGAGGCTCTAAAAGGCTGCGATGGTGTTTTCCATGTTGCAGCTTCTATGGAATTCAACGTCGACGACAAACAAAACATTGAATCTTATGTTCAAGAAAACATAATAGACCCTGCAATCAAAGGAACCTTAAACCTTCTGAATTCATGCTTGAAGTACAAGAATTCAGTGAAAAGGGTTGTGTTCACATCTTCCATAAGTACCATAACTGCCAAGGACAATGATGGAAAATGGAAACAAACAGTTGATGAATCTTGCCAAGTACAACCCCATCATGTATGGAACACACAAGCAAGTGGATGGGTTTATGCACTTTCAAAGCTTCAAAGTGAAGAAGCAGCATTTAAATTTGCAAAAGAGAACGAAATTGATCTTGTGTCAGTTATAACAACCACTGTTGCAGGCCCATTTTTCACGGCCAATGTACCTTCCAGTCTTAAAGTTCTTCTCTCACCAATTACAGGTGAACCTCAATTTTACAAGATATTAAATGCTGTGAATTCAAGAATGGGGTCAATAGGTTTGGTTCACATTGAAGACATATGCAATGCACACATATTTCTAATGGAGAATGACAGAGCACAAGGTAGATACATATGCAGCAGCCTAAGTTGTCCATTGTCAAAGTTGGCTAATCTTCTTCACCAACACTATTCTCACCCAAACATCAAAAGGGTTGCTGAGAATAATTATGACAAAGTTCCTTGTGAGATTTCCTCAAACAAGTTAAATGATCTTGGATTTAGCTACAAGCATGGCCTTGAAGATATAATCAATCAAACAATCATGTGTTGTTTAGATTATGGTTATTTACCTCCTATTAGCTAA 1065 0.384 MEEALNKMVMKVDPSSTTYCVTGATGYIGSYLVEILLQRGYKVHATLRDPEKSLHLMSVWGGGDRLRLFKADLNEEGSFDEALKGCDGVFHVAASMEFNVDDKQNIESYVQENIIDPAIKGTLNLLNSCLKYKNSVKRVVFTSSISTITAKDNDGKWKQTVDESCQVQPHHVWNTQASGWVYALSKLQSEEAAFKFAKENEIDLVSVITTTVAGPFFTANVPSSLKVLLSPITGEPQFYKILNAVNSRMGSIGLVHIEDICNAHIFLMENDRAQGRYICSSLSCPLSKLANLLHQHYSHPNIKRVAENNYDKVPCEISSNKLNDLGFSYKHGLEDIINQTIMCCLDYGYLPPIS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1083 354 Pfam NAD dependent epimerase/dehydratase family 20 272 IPR001509 -
Ahy18g1083 354 Gene3D - 9 351 - -
Ahy18g1083 354 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 15 341 - -
Ahy18g1083 354 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 15 341 - -
Ahy18g1083 354 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 349 IPR036291 -
Ahy18g1083 354 CDD FR_SDR_e 19 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1083 Ahy-Chr18 16138759 16143746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1083 13 341 Miscellaneous Gene Families AT4G27250 58.806 1.06e-132 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1083 - - ccaj:109815084 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1083 18 16138759 16143746 Ahy18g1083 18 16138759 16143746 ECH
Ahy18g1083 18 16138759 16143746 Ahy8g1815 8 36382894 36388093 hybridization