Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1079 ATGGCTAGTTCCAAGAGGCAAATTGAGGTTCAAACAGAAGATCAAACACCACATAAATGGTGCAAATCATTGGGAGAAGAGGTTTTCAAAAGATTCTTCAGCCAGGCTAATCCAACAGTGCATAAGGTTTTTGGTGATGGATCATTATTCAGTCCTATGTTGTTTGGGAAATTCTTTGATCCTTCTGATGCATTTCCTCTTTGGGAGTTTGAGTCAGATGTGTTGTTGTCTCATCTTAGGAGCAACAATCAAACCTCTGTTGATTGGTCTGAGACAGATGATGGATACATAGTAAAGGCTGAAATACCAGGAGCAGGGAAAAGTAACAACATTCAAGTGCATGTTGATAATGGAAAAGTTGTGGAGATTAGTGGACCATGGAAGCAAAGAGAATCATCATCAAAGTCGTCATCATCATCATCATCACATGACTGGAGGTGTGGCCATTGGTGGGATCATGGATTTGTAAGAAGGCTTGAGATTCCAGATGATGCTGATTTCAAGAACATTGAAGCTCACTTATACAATGACGTTTTCTTAGAGATACAAATCCCAAAGACCAAAAGGGGTACCATTGCTGATGTGGCCTAA 591 0.4027 MASSKRQIEVQTEDQTPHKWCKSLGEEVFKRFFSQANPTVHKVFGDGSLFSPMLFGKFFDPSDAFPLWEFESDVLLSHLRSNNQTSVDWSETDDGYIVKAEIPGAGKSNNIQVHVDNGKVVEISGPWKQRESSSKSSSSSSSHDWRCGHWWDHGFVRRLEIPDDADFKNIEAHLYNDVFLEIQIPKTKRGTIADVA* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1079 196 Gene3D - 27 193 IPR008978 -
Ahy18g1079 196 PANTHER 21.7 KDA CLASS VI HEAT SHOCK PROTEIN 3 188 - -
Ahy18g1079 196 PANTHER 21.7 KDA CLASS VI HEAT SHOCK PROTEIN 3 188 - -
Ahy18g1079 196 Pfam Hsp20/alpha crystallin family 88 190 IPR002068 -
Ahy18g1079 196 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 78 196 IPR002068 -
Ahy18g1079 196 SUPERFAMILY HSP20-like chaperones 52 189 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1079 Ahy-Chr18 16064798 16066374 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1079 - - gmx:100306244 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1079 18 16064798 16066374 Ahy18g1079 18 16064798 16066374 ECH
Ahy18g1079 18 16064798 16066374 Ahy8g1811 8 36351628 36353270 hybridization