Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1069 ATGGAGGGACAAAAGAAGCTCAAAAAGTCCAAGGTTGTCAAGATAGAATCTCAAGAATCATGGCAACACCACATCTCTCATGCTAACAACAAAGGTTACCCTGTTGTAGTTCACTTCTCTGCTTTTTGGTGCATAACCTCTACACTCATGAATCCTTTGTTTGAAGAACTTGCCTCCACTTATCAAGATGCCATGTTTCTCAATTTGGATGTGGATGAGTTTAAGGAAATTGCGTCCAAGTTTGAAATCAAAGCCATGCCCACATTTGTGCTGCTGAATGGAGGAACTGCAGTTGATAAAATTGTAGGTGCAAATCCTGATGAGATTAAGACAAGGGTGGATCATTTTATTCATTCAGCTCCTTCCCATAAATAA 375 0.3973 MEGQKKLKKSKVVKIESQESWQHHISHANNKGYPVVVHFSAFWCITSTLMNPLFEELASTYQDAMFLNLDVDEFKEIASKFEIKAMPTFVLLNGGTAVDKIVGANPDEIKTRVDHFIHSAPSHK* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1069 124 SUPERFAMILY Thioredoxin-like 6 117 IPR036249 -
Ahy18g1069 124 Pfam Thioredoxin 13 113 IPR013766 -
Ahy18g1069 124 PANTHER THIOREDOXIN 1 121 - -
Ahy18g1069 124 PANTHER THIOREDOXIN 1 121 - -
Ahy18g1069 124 Gene3D Glutaredoxin 1 122 - -
Ahy18g1069 124 ProSiteProfiles Thioredoxin domain profile. 1 118 IPR013766 -
Ahy18g1069 124 CDD TRX_family 19 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1069 Ahy-Chr18 15937510 15938842 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1069 K03671 - gmx:100813627 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1069 18 15937510 15938842 Ahy18g1069 18 15937510 15938842 ECH
Ahy18g1069 18 15937510 15938842 Ahy8g1804 8 36272378 36273534 hybridization