Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1046 ATGATTTCCTCAAGCAAACTCAAATCCGTTGATTTCTACAGAAAAATCCCTAGAGATTTAACTGAGGCATCACTATCTGGAGCGGGGTTATCCATAGTAGCAGCTCTTTCCATGATCTTTTTATTTGGAATGGAACTCAGTAATTATTTGTCTTTCAGCACCACTACATCTGTGATTGTTGACAAGAGTTCTGACGGGGAGTTTTTACGTATAGATTTCAATATCAGTTTTCCTGCACTTTCATGCGAGTTTGCATCAGTTGATGTGAGTGATGTGCTGGGAACAAACAGACTGAATATAACAAAAACAGTTCGCAAGTTTTCTATTGATACAAATTTAAGACCCACTGGGGCTGAATTTCATTCAGGGACAACTGCAAACATCATTAAACATGATGAGCTAGTAGAGGAAGAATCAGTTGAAGGTTCTCTTACACTTACATCACGCAATTTTGATAAATATTCTCGTCTGTTTCCAATTACAGTTGTAAATTTTTATGCTCCTTGGTGTTACTGGAGTCAACGCTTGAAACCTTCATGGGAGAAAGCAGCTAAAATAATAAAAGAGAGATATGATCCAGAGATCGATGGCCGTATTGTTTTGGGGAAGGTAGATTGCACGGAAGAAGGAGATTTATGCCGGAGCCATCACATACAAGGGTATCCATCAATTCGTATCTTCCGTAAAGGAAGTGATATCAGAGATGACCATGGAGATCATGATCATGAGTCCTATTATGGAGATCGTGATACAGATAGCCTAGTCAAGACAATGGAGAAGTTAGTGGCTTCTCTCCCTGCAGAATCTCAGAAGCTAGGTTTGGAGGATAAATCCAATGGTACAGAGTACAGAAAAAGACCTGCACCTTTAGCTGGGGGATGTAGAATTGAAGGATATGTGCGTGTCAAAAAGGTTCCAGGAGATTTGGTTATATCAGCTAGATCTGATGCCCATTCTTTCGATGCTTCTCAAATGAACATGTCACATGTCGTACACCATCTATCTTTTGGACGGAAATTGTCACCTAGGGTTTTGAGTGATGTGAAGCGCTTGATACCTTATGTTGGTAGCAGCCATGAAAGGTTGAATGGCCGGTCATTCATCAATACGCGTGATTTAGGAGCAAATGTTACTATGGAGCATTACCTCCAGATAGTTAAAACAGAGGTGATTACTGGAAAAGATTATAAATTAGTTGAGGAGTATGAATACACAGCACACAGCAGTGTAGCACAGAGTGTACACATTCCTGTGGCAAAGTTCCATCTTGAGCTCTCCCCCATGCAGGTCTTAGTAACAGAAAACCCGAAATCTTTTTCACATTTTATAACAAATGTCTGTGCTATCATTGGGGGTATTTTCACGGTAGCTGGAATTTTGGACTCGATTCTGCACAACACTATTAGACTAATGAAAAAAGTTGAGCTTGGCAAAAACTTTTGA 1443 0.3992 MISSSKLKSVDFYRKIPRDLTEASLSGAGLSIVAALSMIFLFGMELSNYLSFSTTTSVIVDKSSDGEFLRIDFNISFPALSCEFASVDVSDVLGTNRLNITKTVRKFSIDTNLRPTGAEFHSGTTANIIKHDELVEEESVEGSLTLTSRNFDKYSRLFPITVVNFYAPWCYWSQRLKPSWEKAAKIIKERYDPEIDGRIVLGKVDCTEEGDLCRSHHIQGYPSIRIFRKGSDIRDDHGDHDHESYYGDRDTDSLVKTMEKLVASLPAESQKLGLEDKSNGTEYRKRPAPLAGGCRIEGYVRVKKVPGDLVISARSDAHSFDASQMNMSHVVHHLSFGRKLSPRVLSDVKRLIPYVGSSHERLNGRSFINTRDLGANVTMEHYLQIVKTEVITGKDYKLVEEYEYTAHSSVAQSVHIPVAKFHLELSPMQVLVTENPKSFSHFITNVCAIIGGIFTVAGILDSILHNTIRLMKKVELGKNF* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1046 480 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 1 480 IPR045888 -
Ahy18g1046 480 SUPERFAMILY Thioredoxin-like 144 261 IPR036249 -
Ahy18g1046 480 ProSiteProfiles Thioredoxin domain profile. 126 263 IPR013766 -
Ahy18g1046 480 Gene3D Glutaredoxin 130 285 - -
Ahy18g1046 480 Pfam Thioredoxin 145 242 IPR013766 -
Ahy18g1046 480 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-3 1 480 - -
Ahy18g1046 480 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Ahy18g1046 480 CDD PDI_a_family 144 258 - -
Ahy18g1046 480 Pfam Endoplasmic reticulum vesicle transporter 291 461 IPR012936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1046 Ahy-Chr18 15265437 15272345 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1046 - - gmx:100806869 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1046 18 15265437 15272345 Ahy18g1046 18 15265437 15272345 ECH
Ahy18g1046 18 15265437 15272345 Ahy8g1784 8 35931827 35939167 hybridization