Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0588 ATGAGGGACATAATGTCATGTTTTAGTGAGAACGCAGTGAATGTGAGACAACAAGCTTCATGTTCTAGCTACTCATCATCAAGCAACGCTTGCATCAATCCAAGCCTCACACCTTCAACAAGAAACTCAGTTTCCTCTGTTTACAGATCAACACTCTCCAACAAGCACCAGATTCTGATGATCACAGTCACATGGTGCAAGAGCTTCTCCAATCAAGGACTCACTATAAGCTTTGGAACACAAGATCCACCATCACCACCTTTCAGGCTCAACACCAATTCAAGGTTCTTCAGGAAGAAGAAAGGAAGCAAATTGATGGTTGAATCTTCCAATCATGAGTCAAGAATTGAAGTCTTCTGGGATCTTTCCAATGCTAAATACGACACTGGACCTGAACCGGTTGATGGTTTCTATGTTGCGGTTGTTGTTGGTTTGGAAATAGCACTGATCATTGGTCACATAGCAGAAGAATCAGTTACCAAGAAGCTAAAAGCCATGGCAGCAACAAGTTCGGGTAAATTCTCATTGTTATCAAGAAGAGAGCATTGTTCAGGTAACACACTTTACACCACAAAGGCTCAGTTCTGTGAAAATGGAACGTGGCATGATATCATGATAAGGTGCAGTGGTGGAAATGGAAATGAAGGGTTGTTAAAGTCTTCTTCGTCTTCGTCGTCGCCGCCGCCGGCTCTGATGGTTTGCATTGATAAGAAGACAGTGATCCGTGTGAAGAGGCTTCAGTGGAATTTCAGGGGAAATCAAACAATTTTTGTTGATGGTTTGCTGGTTGATTTACTTTGGGATGTTCATAACTGGTTCTTCAATCCTTCTTCTTCTTCTTCTTCTTCTGGGTATGCAGTGTTCATGTTCAGAACAAGGAGTGGTTTGGATAGCAGATTGTGGCTGCAAGAGAAGCCTTCACTCAAAGATAAAGATGCTCTTGAATTCTCATTCCTCATCTATGCTTGTAAGACTGCATAA 981 0.421 MRDIMSCFSENAVNVRQQASCSSYSSSSNACINPSLTPSTRNSVSSVYRSTLSNKHQILMITVTWCKSFSNQGLTISFGTQDPPSPPFRLNTNSRFFRKKKGSKLMVESSNHESRIEVFWDLSNAKYDTGPEPVDGFYVAVVVGLEIALIIGHIAEESVTKKLKAMAATSSGKFSLLSRREHCSGNTLYTTKAQFCENGTWHDIMIRCSGGNGNEGLLKSSSSSSSPPPALMVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHNWFFNPSSSSSSSGYAVFMFRTRSGLDSRLWLQEKPSLKDKDALEFSFLIYACKTA* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0588 326 Pfam Plant protein of unknown function (DUF868) 40 324 IPR008586 -
Ahy18g0588 326 PANTHER EXPRESSED PROTEIN 1 325 IPR008586 -
Ahy18g0588 326 PANTHER DUF868 FAMILY PROTEIN 1 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0588 Ahy-Chr18 5825322 5827081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0588 1 324 EF-hand Containing Proteins AT3G04860 35.692 2.43e-54 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0588 - - aip:107614530 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0588 18 5825322 5827081 Ahy18g0588 18 5825322 5827081 ECH
Ahy18g0588 18 5825322 5827081 Ahy8g1395 8 30130121 30131789 hybridization
Ahy18g0588 18 5825322 5827081 Ahy13g0241 13 2460389 2462441 PCT
Ahy13g0241 13 2460389 2462441 Ahy18g0588 18 5825322 5827081 PCT