Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0533 ATGGTGGAACAACAGCACAAAAACCAGAGACCCCCAAAGAGTAGTAGTAGTAGTAGGGGCTTGTATGTGAAGATGAACCTCTTTCATCACAAACATGGCTACAACTACAACAAGCTCAATCAGCATTATCAACAGCAACAACAAGATAGAAGCTGCTTCTGCAGATACTACAAATGGCTTCTATGGCTCTCTCTCTCCCTCTACTTCTTCACCTCTTTTCTCATCACCAATAACAACAACACCACCGCCCAAAAGACAGAACCAACCGAGAACTTCGTTAAATCCCATGTTGTACCTCGTACACTGTTAGAATCCAGCAACATTGCAAGCAAACTCAAGAATATGAAGGTGTTCATCTACGAGCTCCCATCAAAGTACAACACAGATTGGTTAACCAACGAGAGGTGCAGCACTCACTTGTTTGCGTCGGAAGTCGCCATTCACAGAGCACTCTTGACCAGCGACCTTCGAACCTTTGACCCCAACCAAGCTGACTTCTTCTTCGTCCCGGTCTACGTCTCCTGCAACTTCAGCACCGTCAATGGCTTCCCTTCAATCTCACACGCCCGCAACCTCATTTCCTCCGCGGTGCAACTCATCTCCACACACCACCCTTTCTGGAACCGCACCTCCGGATCCGACCACGTCTTCGTCGCTTCCCATGATTTTGGCGCTTGTTTCCACAATCTCGAAGATGTGGCCATGCAGCATGGGATACTGGAAATAATGAAGAACTCAATAGTGTTGCAGACGTTCGGCGTTGAGTACCAGCACCCGTGCCAACAAGTTGAGAATGTAGTCATACCGCCTTACGTGTCGCCGGAAAGTGTACGGAAGACTCTTGCTAAGAATTCTCCGGCGAACGGACGCAGAGACATTTTTGCGTTCTTCCGTGGGAAAATGGAGGTTCATCCTAAGAACATAAGCGGAAGGTTTTACAGCAAGAGAGTGAGGACGGTGATATGGCGTAAATTCAGCGGTGACCGGAGATTTTACCTCAAGAGGCATAGGTTTGCCGGTTACCAGTCAGAGATAGCGAGGTCTGTTTTCTGTTTGTGTCCACTTGGGTGGGCCCCCTGGAGTCCCAGACTGGTTGAGTCTGTTTTATTAGGATGCGTGCCCGTAATTATCTCAGACGGTATTCGGTTACCGTTTTCGTCTGCCGTGAGGTGGCCGGATATTTCCGTTAGGGTGGCCGAGAGGGACGTCGGGAAGCTTGGGAGGATCCTTGAGCGCGTGGCAGCGACGAACCTCACGGCGATTCAGAGGAACCTGTGGGACCCGAGAACGAGGCGGGCCCTGATGTTCAACGAGGAGGTGCAGGAAGGGGATGCCACGTGGCAGACTCTGGTTAGTCTGAGTGAGAAGCTTGGTAGGTCTTACGGTAGGTCTACAGTTTCTGGCGAATTGGAGAGTGACACGTAA 1425 0.5032 MVEQQHKNQRPPKSSSSSRGLYVKMNLFHHKHGYNYNKLNQHYQQQQQDRSCFCRYYKWLLWLSLSLYFFTSFLITNNNNTTAQKTEPTENFVKSHVVPRTLLESSNIASKLKNMKVFIYELPSKYNTDWLTNERCSTHLFASEVAIHRALLTSDLRTFDPNQADFFFVPVYVSCNFSTVNGFPSISHARNLISSAVQLISTHHPFWNRTSGSDHVFVASHDFGACFHNLEDVAMQHGILEIMKNSIVLQTFGVEYQHPCQQVENVVIPPYVSPESVRKTLAKNSPANGRRDIFAFFRGKMEVHPKNISGRFYSKRVRTVIWRKFSGDRRFYLKRHRFAGYQSEIARSVFCLCPLGWAPWSPRLVESVLLGCVPVIISDGIRLPFSSAVRWPDISVRVAERDVGKLGRILERVAATNLTAIQRNLWDPRTRRALMFNEEVQEGDATWQTLVSLSEKLGRSYGRSTVSGELESDT* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0533 474 Pfam Exostosin family 113 412 IPR040911 -
Ahy18g0533 474 PANTHER GLUCURONOSYLTRANSFERASE, PUTATIVE-RELATED 45 466 - -
Ahy18g0533 474 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 45 466 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0533 Ahy-Chr18 5150378 5153630 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0533 K20889 - gmx:100797984 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0533 18 5150378 5153630 Ahy18g0533 18 5150378 5153630 ECH
Ahy18g0533 18 5150378 5153630 Ahy8g1340 8 29432765 29435992 hybridization
Ahy18g0533 18 5150378 5153630 Ahy13g0285 13 2888018 2890243 PCT
Ahy13g0285 13 2888018 2890243 Ahy18g0533 18 5150378 5153630 PCT