Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0428 ATGAGTGTCACCGGGAAGAAAATGACCAAACAGTTAACAGGGAAGAGGGATGATACCCATTTGCATTCTGCAGCAAGATCAGGGAGTCTCTCTGTACTAAGGGAGACCCTTACTGGTATAGAAGATCAGGAGGAACTCCATGAGCTATTGGCAAGGCAGAACCAAGATGGTGAAACACCTCTTTATGTTGCTGCCGAATATGGTTATGTTGATCTAGTTAGGGAGTTGATTCAACTTTATGATCTTGCTGATGCTGGAATCAAAGCTAGGAACGGTTTTGATGCATTGCATATTGCTGCCAAACAAGGGGATTTAGATATAGTGAAGATCCTTATGGAAGCTCATCCTGAATTATCAATGACTGTGGATCAATCTAACACCACAGCATTGCACACGGCGGCGACACAAGGGCACGTTGAGATAGTGAAGCTCCTCTTGGAAGCAGGAAAAGGCTTGGCAACCATTGCCAAGAGCAATGGGAAAACAGCTTTGCATTCTGCTGCAAGGAATGGACATGTTGCGGTTGTGAAAGTGCTTCTTGAGCAGGACAGAGAGATTGCAACTCGAATCGATAAGAAGAGGCAGACGGCGCTTCATATGGCCGTGAAGGGACAGAATCTTGAGGTGGTGGAGGAGTTGATCAAAGGAGATCCATCAACTATAAACTTTGTTGACAATAAGGGAAACACACCATTGCATATAGCATCTAGAAAGGGCAGGGCTCAGATTGTAAAGAAGCTTCTTGAGCAGAAAGAAACAAACAAAAAAGTTGTTAACAGGTCTGGTGAGACTGCTTTAGACACTGCTGAAAAAATGGGGAACCACGATGTTAAGAATATTCTGTTAGAGCACGGCGTTGTGAACGCCAACGCCTTAGTAAAGTCCCATGGAATTACAGCCACAACCACAGCCACAGCCACGACCGCAACCACGTCTGCCAGGGAGCTAAAACAAACTGTGAGTGACATCAAACATGAGGTCCACAACCAGTTAGAGCACACCCGACAAACGCGAAAGCGGGTGCAAGGCATAGCAAAGAGAATCAACAAGATGCACCAAGAAGGCCTAAACAATGCAATAAACTCAACAACCGTGGTGGCAGTGCTAATTGCAACGGTGGCATTCGCGGCGATCTTCACAGTCCCCGGGCAGTTTGTTGATGATCCAAGCGATGTCCCTGAAGGGTCAACACTTGGTGAAGCAAACATAGCACCACAGGGTGCATTCTTGATCTTCTTTGTGTTTGATTCAATTGCACTTTTCATATCCCTTGCTGTGGTTGTGGTTCAAACTTCGGTGGTGGTTATAGAGAGCAAAGCAAAGAAGCAAATGATGGCTATAATAAACAAGCTAATGTGGTTGGCTTGTGTGCTTATAACTGTTTCATTCTTGGCATTGGCTTTTGTTGTTGTTGGGAAACAAGAGATGTGGCTTGCTATTTCGGTTACTGTTATTGGGACAACAATAATGGTTACAACCTTGGGGACTATGTGTTATTGGGTTATTAAGCACCGTATTCAGGCCTCTAATTTGAAGAACATAAGGAGATCTTCCATGGATACAAATAAGACTAAGTCTTCTTCAGTCACTGCTTACTCCGATTCTGAACTACTAAACAGAATGTATGCCATTTAG 1635 0.4434 MSVTGKKMTKQLTGKRDDTHLHSAARSGSLSVLRETLTGIEDQEELHELLARQNQDGETPLYVAAEYGYVDLVRELIQLYDLADAGIKARNGFDALHIAAKQGDLDIVKILMEAHPELSMTVDQSNTTALHTAATQGHVEIVKLLLEAGKGLATIAKSNGKTALHSAARNGHVAVVKVLLEQDREIATRIDKKRQTALHMAVKGQNLEVVEELIKGDPSTINFVDNKGNTPLHIASRKGRAQIVKKLLEQKETNKKVVNRSGETALDTAEKMGNHDVKNILLEHGVVNANALVKSHGITATTTATATTATTSARELKQTVSDIKHEVHNQLEHTRQTRKRVQGIAKRINKMHQEGLNNAINSTTVVAVLIATVAFAAIFTVPGQFVDDPSDVPEGSTLGEANIAPQGAFLIFFVFDSIALFISLAVVVVQTSVVVIESKAKKQMMAIINKLMWLACVLITVSFLALAFVVVGKQEMWLAISVTVIGTTIMVTTLGTMCYWVIKHRIQASNLKNIRRSSMDTNKTKSSSVTAYSDSELLNRMYAI* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0428 544 Gene3D - 5 153 IPR036770 -
Ahy18g0428 544 Gene3D - 154 219 IPR036770 -
Ahy18g0428 544 Pfam Ankyrin repeats (3 copies) 198 286 IPR002110 GO:0005515
Ahy18g0428 544 Pfam Ankyrin repeats (3 copies) 8 79 IPR002110 GO:0005515
Ahy18g0428 544 Pfam Ankyrin repeats (3 copies) 84 149 IPR002110 GO:0005515
Ahy18g0428 544 Pfam Ankyrin repeat 159 181 IPR002110 GO:0005515
Ahy18g0428 544 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 4 540 - -
Ahy18g0428 544 SMART ANK_2a 159 188 IPR002110 GO:0005515
Ahy18g0428 544 SMART ANK_2a 261 291 IPR002110 GO:0005515
Ahy18g0428 544 SMART ANK_2a 125 154 IPR002110 GO:0005515
Ahy18g0428 544 SMART ANK_2a 16 45 IPR002110 GO:0005515
Ahy18g0428 544 SMART ANK_2a 227 257 IPR002110 GO:0005515
Ahy18g0428 544 SMART ANK_2a 91 120 IPR002110 GO:0005515
Ahy18g0428 544 SMART ANK_2a 56 85 IPR002110 GO:0005515
Ahy18g0428 544 SMART ANK_2a 193 223 IPR002110 GO:0005515
Ahy18g0428 544 MobiDBLite consensus disorder prediction 1 20 - -
Ahy18g0428 544 ProSiteProfiles Ankyrin repeat region circular profile. 159 186 - -
Ahy18g0428 544 ProSiteProfiles Ankyrin repeat region circular profile. 56 78 - -
Ahy18g0428 544 ProSiteProfiles Ankyrin repeat profile. 159 191 IPR002110 GO:0005515
Ahy18g0428 544 ProSiteProfiles Ankyrin repeat region circular profile. 125 149 - -
Ahy18g0428 544 ProSiteProfiles Ankyrin repeat region circular profile. 227 249 - -
Ahy18g0428 544 ProSiteProfiles Ankyrin repeat profile. 56 78 IPR002110 GO:0005515
Ahy18g0428 544 ProSiteProfiles Ankyrin repeat region circular profile. 91 113 - -
Ahy18g0428 544 PANTHER ANKYRIN REPEAT PLANT PROTEIN 4 540 - -
Ahy18g0428 544 Gene3D - 220 311 IPR036770 -
Ahy18g0428 544 ProSiteProfiles Ankyrin repeat profile. 91 123 IPR002110 GO:0005515
Ahy18g0428 544 SUPERFAMILY Ankyrin repeat 21 285 IPR036770 -
Ahy18g0428 544 ProSiteProfiles Ankyrin repeat profile. 125 157 IPR002110 GO:0005515
Ahy18g0428 544 Pfam Domain of unknown function 354 469 IPR026961 -
Ahy18g0428 544 ProSiteProfiles Ankyrin repeat profile. 227 249 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0428 Ahy-Chr18 3652646 3655148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0428 2 544 Miscellaneous Gene Families AT1G07710 68.739 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0428 - - gmx:100791519 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0428 18 3652646 3655148 Ahy18g0428 18 3652646 3655148 ECH
Ahy18g0428 18 3652646 3655148 Ahy13g0407 13 4234813 4238025 ECH
Ahy18g0428 18 3652646 3655148 Ahy8g1234 8 27732333 27734713 hybridization