Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0320 ATGAAGAAATATATGGCACCCAATAATAACAAGCCCATTTTCGTACTTGTCTCTCTCTTCTTCTTCTTCTATGCTCTTATTATCACTTCCTCTTCTTCTGCATCACCAGTTTCTCCCATTCTTGATGTTTCTTCCCTCAACCGAACCTCTTTTCCAAAACCCTTCATCTTTGGAACTGCTTCCTCATCCTACCAGTATGAAGGTGCAGCAAGGGAAGGTGGAAGAGGAGCAAGCATATGGGATACCTTCACCCACAAATATCCAGAAAGGATACAAGATAGAAGCAATGGAGATGTTGCAAATGACGAATATCACCACTACAAGGAAGATGTTGGGATTATGAAGTATATGAATTTAGATGCTTATAGATTCTCTATCTCTTGGTCCAGAATACTCCCAAAAGGAAAGCTTAGTGGAGGCATAAATCAAGAAGGAATCAAATATTACAACAATCTCATTGATGAATTATTATCAAATGGTATAAAACCATTTGTAACTCTTTTTCATTGGGATCTTCCCCAGACATTAGAAGACGAGTATGGTGGCTTCTTAAGCCCTAACATTATAAATGATTTTGGAGATTATGCGGAGGTTTGCTTTAAAGAATTTGGAGATAGAGTGAAGCATTGGATCACTTTGAATGAACCATGGACATATAGCCAAGGTGGCTATGCAAGTGGCATGCTTGCACCTGGTAGATGTTCAAAATGGGTGAATCCAAATTGCAGTGCTGGTGATTCTGCTACTGAACCCTATTTGGTTGCTCACCATCAACTTCTTTCTCATGCTTCTGCTGTGCAACTCTACAAGAAAAAATATCAGGAATCTCAGAAGGGTGTGATAGGTATAACTTTGGTGTCTCATTGGTTTGTGCCAACTTCAAATAGCAAACTTGATCAAATGGCTGCGGAGAGAGCAATTGACTTTATGTTTGGATGGTTTATGGAACCATTGACAAGAGGAGATTATCCTAAAAGCATGAGATCTTTGGTAGGGAAAAGGTTGCCTAAATTCTCTGCAGATGAAGTCAAAGTAGTCAAAGACTCATTTGATTTTATTGGGTTAAATTATTATACCACCAACTATGCTGCTTACTCACATAAGCTCACAAATGCCAAACCTAATTACCTCACTGATTCCCATGCCAATCTTACAACTGAACGCAATGGAGTTCCCATAGGTCCAAGGGCTGCTTCCAATTGGTTATATGTATATCCAAAAGGAATTCAACAGCTATTACTTTATACCAAGCAAAAATATAACAACCCTTTGATTTATATCACTGAAAATGGAATAGATGAGTTCAATGATCCAACACTATCACTTGAAGAAGCTCTTATAGATACTTTTAGAATTGATTATTATTATCGCCATCTATTTTATCTTCAGTCCGCAATAAGGGAGGGCGTAAATGTGAAAGGATACTTTGCATGGTCATTATTGGACAACTTTGAATGGGCTTCAGGATATACAGTGAGATTTGGAATAAATTTTGTGGATTATAATAATGGTTTGAAAAGACATTATAAACTGTCCGCAAAATGGTTCAAGAACTTTCTCAAAAAATATTAG 1572 0.374 MKKYMAPNNNKPIFVLVSLFFFFYALIITSSSSASPVSPILDVSSLNRTSFPKPFIFGTASSSYQYEGAAREGGRGASIWDTFTHKYPERIQDRSNGDVANDEYHHYKEDVGIMKYMNLDAYRFSISWSRILPKGKLSGGINQEGIKYYNNLIDELLSNGIKPFVTLFHWDLPQTLEDEYGGFLSPNIINDFGDYAEVCFKEFGDRVKHWITLNEPWTYSQGGYASGMLAPGRCSKWVNPNCSAGDSATEPYLVAHHQLLSHASAVQLYKKKYQESQKGVIGITLVSHWFVPTSNSKLDQMAAERAIDFMFGWFMEPLTRGDYPKSMRSLVGKRLPKFSADEVKVVKDSFDFIGLNYYTTNYAAYSHKLTNAKPNYLTDSHANLTTERNGVPIGPRAASNWLYVYPKGIQQLLLYTKQKYNNPLIYITENGIDEFNDPTLSLEEALIDTFRIDYYYRHLFYLQSAIREGVNVKGYFAWSLLDNFEWASGYTVRFGINFVDYNNGLKRHYKLSAKWFKNFLKKY* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0320 523 PRINTS Glycosyl hydrolase family 1 signature 448 459 IPR001360 GO:0004553|GO:0005975
Ahy18g0320 523 PRINTS Glycosyl hydrolase family 1 signature 469 486 IPR001360 GO:0004553|GO:0005975
Ahy18g0320 523 PRINTS Glycosyl hydrolase family 1 signature 493 505 IPR001360 GO:0004553|GO:0005975
Ahy18g0320 523 PRINTS Glycosyl hydrolase family 1 signature 349 363 IPR001360 GO:0004553|GO:0005975
Ahy18g0320 523 PRINTS Glycosyl hydrolase family 1 signature 425 433 IPR001360 GO:0004553|GO:0005975
Ahy18g0320 523 Pfam Glycosyl hydrolase family 1 49 522 IPR001360 GO:0004553|GO:0005975
Ahy18g0320 523 PANTHER GLYCOSYL HYDROLASE 21 522 IPR001360 GO:0004553|GO:0005975
Ahy18g0320 523 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 55 69 IPR033132 -
Ahy18g0320 523 Gene3D Glycosidases 31 522 - -
Ahy18g0320 523 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 21 522 - -
Ahy18g0320 523 SUPERFAMILY (Trans)glycosidases 39 521 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0320 Ahy-Chr18 2686766 2698404 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0320 20 522 Glycoside Hydrolase AT5G44640 56.151 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0320 - K01188 gmx:100812431 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0320 18 2686766 2698404 Ahy8g1120 8 26290305 26310779 hybridization
Ahy18g0320 18 2686766 2698404 Ahy13g0584 13 6117126 6121109 PCT