Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0297 ATGCAGATGCTCTCAAGGGCTTCATCTGCCATGGCCACCTTCCCTCCCTCTAGGGTGAGAAGTGGGTTTTGTATGTGGCCAAATGCAAGACAACTTTGCTTTAGAAAAGGGATTCTGTATGGATTCATGAGGTTGTTTTCTACACCATTGAAAACGCTTCGGGTAGCTAGTCGTTCAATCCGAGTAGGACGATTTTGCAGTGTTGCCAGCATGTCTTCCTCCTTGCAGATTGAATTGGTACCATGCTTGAGAGACAATTATGCTTATCTCTTGCATGATGTGAACACGGGTACTGTTGGTGTCGTCGATCCTTCTGAAGCTGTGCCTATCATTGATGCATTGAGCAGGAAAAATATAAATTTGACATACATACTCAACACTCACCATCATTATGATCACACTGGTGGAAATGAAGAGTTGAAAGCAAGATATGGAGCAAAGGTGATTGGTTCAGGAATTGACAAGGAAAGGATTCCTGGCATTGATATCTATTTGAATGATGGCGATAAGTGGATGTTTGCTGGCCACGAGGTGCATGTTATGGACACACCTGGTCACACTCGAGGCCATATAAGCTTTTACTTTCCTGGATCTAAGGCGATATTTACCGGAGACACTCTGTTCAGCTTATCGTGTGGCAAGCTTTTTGAAGGAACTCCTGAACAGATGCAATCGTCTCTTACAAAGATAATGTCCTTGCCAGACGAAACAAGCATCTACTGTGGACATGAGTATACATTGAGTAATTCAAAGTTTGCACTGTCCATTGAGCCTGGAAACAAGGAGCTTCAATCGTATGCTGCGCATGTAGCTTCCCTTCGAAGCAAGGGCATGCCGACGATTCCAACAACACTGAAGACGGAAAAGGCCACAAATCCATTCCTTCGAACGTCCAGCGCAGAAATCCGGCGAGTATTAAAGATTGCAGATACGGCCGACGATGCAGAAACCCTGGGCGTCATTCGGCAAGCAAAGGATAATTTTTAG 987 0.4478 MQMLSRASSAMATFPPSRVRSGFCMWPNARQLCFRKGILYGFMRLFSTPLKTLRVASRSIRVGRFCSVASMSSSLQIELVPCLRDNYAYLLHDVNTGTVGVVDPSEAVPIIDALSRKNINLTYILNTHHHYDHTGGNEELKARYGAKVIGSGIDKERIPGIDIYLNDGDKWMFAGHEVHVMDTPGHTRGHISFYFPGSKAIFTGDTLFSLSCGKLFEGTPEQMQSSLTKIMSLPDETSIYCGHEYTLSNSKFALSIEPGNKELQSYAAHVASLRSKGMPTIPTTLKTEKATNPFLRTSSAEIRRVLKIADTADDAETLGVIRQAKDNF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0297 328 SUPERFAMILY Metallo-hydrolase/oxidoreductase 75 328 IPR036866 -
Ahy18g0297 328 Gene3D - 75 328 IPR036866 -
Ahy18g0297 328 PANTHER HYDROXYACYLGLUTATHIONE HYDROLASE 3 328 - -
Ahy18g0297 328 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 78 328 IPR017782 GO:0004416|GO:0019243
Ahy18g0297 328 CDD hydroxyacylglutathione_hydrolase_MBL-fold 80 243 IPR035680 -
Ahy18g0297 328 Hamap Hydroxyacylglutathione hydrolase [gloB]. 75 328 IPR017782 GO:0004416|GO:0019243
Ahy18g0297 328 PANTHER BETA LACTAMASE DOMAIN 3 328 - -
Ahy18g0297 328 Pfam Metallo-beta-lactamase superfamily 88 243 IPR001279 -
Ahy18g0297 328 Pfam Hydroxyacylglutathione hydrolase C-terminus 244 328 IPR032282 -
Ahy18g0297 328 SMART Lactamase_B_5a 85 243 IPR001279 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0297 Ahy-Chr18 2464211 2467588 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0297 K01069 - gmx:100816314 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0297 18 2464211 2467588 Ahy18g0297 18 2464211 2467588 ECH
Ahy18g0297 18 2464211 2467588 Ahy8g1092 8 25964229 25967683 hybridization
Ahy18g0297 18 2464211 2467588 Ahy13g0611 13 6359063 6362801 PCT
Ahy13g0611 13 6359063 6362801 Ahy18g0297 18 2464211 2467588 PCT