Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0292 ATGGTTGTAGCCAATGCAATCAAAGGCCTAGTTTCTGTTTTAGTGATTATGGTGTTGATTTTACCACAAATTGCTGCTCAAGTTCTTCCACCAGCTGATTCTCCATCAGATAATGCACCAGAACAGATTTGGCAGCTTGATAATACTGTTAGAGTGGATCCTTTAGATAATTTAAGAAAGTACAAAGGAGGATTTGACATCACCAACAAGCACTATTGGAGTTCAGTGATCTTCACAGGAGTTTATGGATATGCAATTGGGATCCTCTTCCTTTTTTGTGGAACATTATATGGAGGTTGTTTGTTAGTAACAACCAAGTTCTATGGCAAAAGTGAGAAACCAAAAAGGGTGAAGAATGTGTTTCCTTACAAGAGTTTTGATGTTTCAATTATCCCTTTGGCTATATTGCTCACCATATTAGCCATAGTTGCAACTGGGCTTGTTCTTGCTGGGAGTGCAAGATTCCATTCTGAAGCAGAAAGTTCAGTTGGAATTATAATAAAGACAGCAAATGAGGCATCAGAGACAATAAACAACACAGCAGGAGCATTAAAAGACATGGAAAGTAACTTGATGGAAGACAATGTCAATAATGCTGTGGTTTCTGTGAGACTTGACTCAACAACTGAGAGGCTTGATGATGCATCTGCAAATATTGAAAAGGAAGCTAGCAAGAATAGGCGCCTTATCAACAAGGGCTTGAAACTTGTATTTGTGATTACCATTGTGATTATGAGCTTCAACTTGGTTGCAGTGACAGTTTTGTCAGTTTCCGGAGTACTGAGGTTGCGACGAGCACTTTACTTGTTAATCACACTTTGCTGGTTGATGACAGTGATATGCTGGATATTCTTTGGGATCTATTTCTTCTTAGAAAAATTTTCTGGTGATGCTTGCACAGCACTTGACAACTTTCAAGAAAATCCATACAATAACAGCTTAAGTTCCATACTTCCTTGTGATGAATTGCTCTCAGCAAAATCAGTCCTGTCTGGTGTTAGTGCTGGAATCTATAACCTTGTAAATAAGGTGAATGAAAACATATCAGGCATGCAGGCAACATCATATCCAAATCTTGTTCATGTTTGCAACCCTTTCTCGGCGCCGCCGGAGTATCTATACCAGCCACAGAACTGCCCTGCCAACACCATAAGAATAGGAGACATTGCAAAGGTACTAAAGCCTTTTACATGTTCTGATGGAACATGTGACAGTGAAAGTGGAAGCAGTTTCATAATAAGTGGAAGTGAATATGTGAGAGTTGAAGCATTCACAAGTTCAATTCAGGACTTACTAAATGTATATCCAAGCATGGAGAACTTGTTGGAATGCCAGCTTGTGAAGGATGCATTCTCTGAAATTCTTGTCAAACACTGCAATCCATTGAAGAGATATGCAAAGATGGTGTGGTCTGGAATGGTTCTTGTTGCTGTGATCATGCTGGTTTTGGTTCTACTGTGGACTCTAAAGGCTCATGTTTCATATGGTTCTGTTGAGCCACAATGTGCAACACAACCCAGTAACTTGGAATTAGGCTCCACTAAAGTTGTTAATAACAACTATAACAACAAAGTCGTATCCCACTAG 1587 0.3945 MVVANAIKGLVSVLVIMVLILPQIAAQVLPPADSPSDNAPEQIWQLDNTVRVDPLDNLRKYKGGFDITNKHYWSSVIFTGVYGYAIGILFLFCGTLYGGCLLVTTKFYGKSEKPKRVKNVFPYKSFDVSIIPLAILLTILAIVATGLVLAGSARFHSEAESSVGIIIKTANEASETINNTAGALKDMESNLMEDNVNNAVVSVRLDSTTERLDDASANIEKEASKNRRLINKGLKLVFVITIVIMSFNLVAVTVLSVSGVLRLRRALYLLITLCWLMTVICWIFFGIYFFLEKFSGDACTALDNFQENPYNNSLSSILPCDELLSAKSVLSGVSAGIYNLVNKVNENISGMQATSYPNLVHVCNPFSAPPEYLYQPQNCPANTIRIGDIAKVLKPFTCSDGTCDSESGSSFIISGSEYVRVEAFTSSIQDLLNVYPSMENLLECQLVKDAFSEILVKHCNPLKRYAKMVWSGMVLVAVIMLVLVLLWTLKAHVSYGSVEPQCATQPSNLELGSTKVVNNNYNNKVVSH* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0292 528 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 15 517 IPR040283 -
Ahy18g0292 528 PANTHER OS11G0264500 PROTEIN 15 517 - -
Ahy18g0292 528 Coils Coil 170 190 - -
Ahy18g0292 528 Coils Coil 205 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0292 Ahy-Chr18 2405807 2409339 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0292 - - gmx:100805495 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0292 18 2405807 2409339 Ahy8g1081 8 25803057 25806535 hybridization
Ahy18g0292 18 2405807 2409339 Ahy13g0616 13 6408766 6410772 PCT
Ahy13g0616 13 6408766 6410772 Ahy18g0292 18 2405807 2409339 PCT