Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0252 ATGTACCTGAGAGGAAGTTGGCGTGCTAATAATCATTGGGGTTCATCGGTTTCTAAGAGTAGAATCCACAGCAAGAGGGATAGAAAGTTGAATGCTCTAGTATCAAAGCAAGATCTTCATCAATCTTCAAGCTCGTTACCAAGGAGAAGGAAGTTACAATATCTAAAGCTACCACCTACATTGTTCTCCTTCCAATTTCTTGAATCCGTCATGAAATTGCAAGTGAAAGACGTGTGCAAGAAGCAACAACACCACCCCATTGATTTGTTACCGAAACCAGAAGCATGGTTATTGTCTTTTGAAGTTCTTCACGTGGCTGCAGTGAAGCTCCAGAAAGTTTACAGGAGTTACAGGACAAGAAGAAATCTCGCAGACTGCGCAATCGTCTGCGAGGAGCTTTGGTGGAAGGCTTCTGAATTTGCCGATAAAACAGAATCAGCTATATCAAAATGGAGAAGAGCTAGAGCCATGGCTGATGAGATGGGAAAAGAGTTTTCCAAAGATTATAAGGCGCAGAATTTGGCTCTAAGTCACTGGCTTGAAGCCATTGATCCACGTCATCGTTACGGGCACAACTTGCACTTTTATTACAACATCTGGTTTTGGAGCAAGAGCTCCCAGCCCTTTTTTTACTGGCTGGATGTTGGAGATGGCAAGGAAGTTAACCTTGAAATATGCTTAAGAAAGAACTTGCAAAGGCAACGAATTACTTACCTTGGACCTGAGGAGAGGGAAGCATATGAGGTGATGATTGTGGAAGGAGGAAAACTGGTTTATAAGCAAAGCCAGAAACCTGTTCATACCACTGATGGGTCTAAGTGGATTTTTGTTCTTAGTCCATCAAGAGTTTTGTATGTTGGTCAGAAAAAGAAAGGAGAATTCCAACATTCTAGTTTTCTAGCTGGAGCTGTTACCACTTCTTCTGGAAGATTAGTTGCCCATAATGGAGTCATTGATGCTATTTGGCCCTACAGTGGTCATTACCGTCCAACAGCAAAGAATTTCTTGGAATTCTTACATTTCTTGGAAGCTCACCATGTTGATTTGACTAATGTCAAGAAATATCCAGTAGACGACGACGTGCCAAGTGAAATGGGATCAAGTGAGTCGCCAACAAATGAAAACTCGGCAATAATACAAGCAAGCAAGTGGAGCACTGGAGTTGGTCCAAGAATTGGTTGCATGACAGAGTACCCTAAAGAGCTGCAAGTGATGGCACTTGAGCACCTTGGAAGATTTGTTGGCATGGCACCCATTGCATCTCCAAGACCTACTCTCAAACTCCACCTCTCCCCTAAACTTGTCTACATGGGAATAGAATGA 1323 0.4271 MYLRGSWRANNHWGSSVSKSRIHSKRDRKLNALVSKQDLHQSSSSLPRRRKLQYLKLPPTLFSFQFLESVMKLQVKDVCKKQQHHPIDLLPKPEAWLLSFEVLHVAAVKLQKVYRSYRTRRNLADCAIVCEELWWKASEFADKTESAISKWRRARAMADEMGKEFSKDYKAQNLALSHWLEAIDPRHRYGHNLHFYYNIWFWSKSSQPFFYWLDVGDGKEVNLEICLRKNLQRQRITYLGPEEREAYEVMIVEGGKLVYKQSQKPVHTTDGSKWIFVLSPSRVLYVGQKKKGEFQHSSFLAGAVTTSSGRLVAHNGVIDAIWPYSGHYRPTAKNFLEFLHFLEAHHVDLTNVKKYPVDDDVPSEMGSSESPTNENSAIIQASKWSTGVGPRIGCMTEYPKELQVMALEHLGRFVGMAPIASPRPTLKLHLSPKLVYMGIE* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0252 440 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 377 439 IPR044159 -
Ahy18g0252 440 ProSiteProfiles IQ motif profile. 103 132 IPR000048 GO:0005515
Ahy18g0252 440 PANTHER CALMODULIN-BINDING FAMILY PROTEIN 31 365 - -
Ahy18g0252 440 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 31 365 IPR044159 -
Ahy18g0252 440 PANTHER CALMODULIN-BINDING FAMILY PROTEIN 377 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0252 Ahy-Chr18 2057151 2061955 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0252 - - adu:107461326 904.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0252 18 2057151 2061955 Ahy18g0252 18 2057151 2061955 ECH
Ahy18g0252 18 2057151 2061955 Ahy8g1039 8 25240092 25244272 hybridization
Ahy9g0503 9 6672244 6677581 Ahy18g0252 18 2057151 2061955 PCT