Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0230 ATGGTGAGCATGAGCTTCAAGCTCATAATGTGGAATGTGCTTCTTCCCTTGCTGCTCCTGGCATCTTCATTCTTTGTTTCTTGTAATGCTTCTGTGTCCTATGACTCAAAGGCTATCACCATTAATGGCCAAAGAAGGATCCTCATTTCTGGATCCATTCATTACCCTAGAAGCACCCCTGAGATGTGGCCAGATCTCATTCAAAAGGCTAAGGAAGGAGGTTTGGATGTGATTCAGACTTATGTTTTCTGGAATGGCCATGAACCTTCACCTGGCAAATATTATTTTGAGGGAAACTATGATCTGGTGAAGTTCATAAAGTTGGTGCAGCAAGCAGGCCTTTATGTGCATCTAAGGATTGGTCCTTATGTCTGTGCTGAGTGGAACTTTGGGGGTTTCCCTGTTTGGCTGAAGTACATTCCAGGTATCAGCTTCAGAACAGACAATGGCCCTTTTAAGTTTCAAATGCAAAAGTTTACCACGAAGATTGTCGATATGATGAAGGCAGAAAGATTATATGAAACTCAGGGAGGTCCAATAATTCTATCCCAGATTGAAAATGAATATGGACCTATGGAGTATGAAATTGGTGCTTCTGGTAAGTCCTACACTAAGTGGGCAGCAGATATGGCTGTAGGACTTGGTACTGGGGTTCCATGGGTCATGTGCAAACAAGATGATGCTCCTGATCCTATGATTAACACTTGCAATGGTTTCTATTGTGATTACTTCTCTCCAAATAAGGCTTACAAACCAAAGATGTGGACGGAAGCTTGGACTGCATGGTTTACTGAATTTGGAGGTTCGGTTCCTTATCGACCTGCTGAAGATTTAGCATTTGCAGTTGCAAGATTTATACAGAAAGGGGGAGCATTTGTCAATTATTACATGTATCACGGGGGAACAAATTTCGGTAGAACTGCTGGTGGTCCATTTATTGCTACAAGCTATGATTATGATGCACCTATTGATGAATATGGACTTCTCAGGCAGCCGAAGTGGGGTCATCTTAAAGATTTACATAGAGCAATAAAACTCTGTGAACCTGCTTTAGTTTCGGGGGATCCTGCTGTAACAAAGATTGGAAACTATCAAGAGGCTCATGTCTTCAAATCAGACTCAGGAGCTTGTGCTGCATTCCTTGCAAACTATGACCCAAAATCTTTTGCAAAAGTGGCATTTGGGAATATGCACTATAACCTGCCTCCTTGGTCTATTAGCATTCTTCCTGACTGCAAGAACACTGTTTATAACACTGCACGGGTTGGTTCACAGAAGGCACAGATGAAGATGACTCGAATTCCCATTCATGGAGGACTCACTTGGCAATCATTTAATGAAGAACCAGCATCTACTGATGACAGTTCCTTCACCATGACTGGCCTATTGGAACAGTTAAATACAACTAGAGATTTATCTGACTACCTTTGGTACTCCACAGATGTTGTGATTGATTCCAATGAAGGATTTTTGTGGAATGGAAAGGATCCTGTTCTTACAGTGTTATCTGCTGGGCATGCCTTGCATGTGTTTGTCAATGGTCAGCTATCAGGAACTGCTTATGGAAGCTTAGAATTCCCCAAACTAACATTTAGCCAGGCTGTGAAGCTCAGAGCTGGTGTTAATAAAATCTCTCTTCTAAGTGTTGCAGTTGGACTACCGAATGTTGGTCCACATTTTGAAACATGGAATGCTGGTGTTCTTGGCCCAATTACATTATACGGTCTCAACGAGGGGAGAAGGGACTTGTCTTGGCAGAAATGGTCTTATAAGATTGGTCTTAAAGGAGAAGCCTTGAGTCTCCATTCTCTCAGTGGAATTTCCTCAGTTGACTGGATTCAAGGGTCTTTAATTTCTCAAAGGCAGCCACTGACTTGGTACAAAACTACTTTTGATGCTCCGGCTGGAACCGCACCATTTGGTTTAGATATGGGCAGCATGGGCAAAGGTCAAGTGTGGCTAAATGGGCAGAGTCTCGGTCGCTACTGGCCTGCTTATAAAGCATCAGGTACCTGTGATTCTTGTGACTATGCCGGAACTTACAACGAGAATAAATGCAGAAGTAACTGTGGGGAGGCTTCTCAAACATGGTATCATGTTCCTCATTCATGGCTAAAGCCAACTGGAAATTTATTGGTTGTGTTTGAAGAACTGGCTGGAGATCCCAATGGCATCTTTCTGGTTAGGCGCGACATAGATAGTGTGTGTGCTGATATTTATGAGTGGCAGCCAAATCTTAGAAGCTACCAGATGCAAGCTTCTGGCAAAGCTGACAAACCTATTAGGCCTAAAGTGCATTTATCATGTGGCTTTGGACAAAAGATCTCGTCGATCAAATTCGCTAGCTTCGGTACTCCAGAAGGATCTTGTGGAAACTTCCATGAAGGAAGCTGCCATGCTCACAAATCATATGATGCATTTCAAAGGAATTGTGTTGGACAGAGCTGGTGCACTGTAACAGTGTCACCCGAAAATTTCGGAGGAGATCCATGTCCAAATGTTATGAAGAAACTCTCAGTGGAGGCTATATGTACCTGA 2538 0.4287 MVSMSFKLIMWNVLLPLLLLASSFFVSCNASVSYDSKAITINGQRRILISGSIHYPRSTPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFIKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKYIPGISFRTDNGPFKFQMQKFTTKIVDMMKAERLYETQGGPIILSQIENEYGPMEYEIGASGKSYTKWAADMAVGLGTGVPWVMCKQDDAPDPMINTCNGFYCDYFSPNKAYKPKMWTEAWTAWFTEFGGSVPYRPAEDLAFAVARFIQKGGAFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPIDEYGLLRQPKWGHLKDLHRAIKLCEPALVSGDPAVTKIGNYQEAHVFKSDSGACAAFLANYDPKSFAKVAFGNMHYNLPPWSISILPDCKNTVYNTARVGSQKAQMKMTRIPIHGGLTWQSFNEEPASTDDSSFTMTGLLEQLNTTRDLSDYLWYSTDVVIDSNEGFLWNGKDPVLTVLSAGHALHVFVNGQLSGTAYGSLEFPKLTFSQAVKLRAGVNKISLLSVAVGLPNVGPHFETWNAGVLGPITLYGLNEGRRDLSWQKWSYKIGLKGEALSLHSLSGISSVDWIQGSLISQRQPLTWYKTTFDAPAGTAPFGLDMGSMGKGQVWLNGQSLGRYWPAYKASGTCDSCDYAGTYNENKCRSNCGEASQTWYHVPHSWLKPTGNLLVVFEELAGDPNGIFLVRRDIDSVCADIYEWQPNLRSYQMQASGKADKPIRPKVHLSCGFGQKISSIKFASFGTPEGSCGNFHEGSCHAHKSYDAFQRNCVGQSWCTVTVSPENFGGDPCPNVMKKLSVEAICT* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0230 845 Pfam Galactose binding lectin domain 767 844 IPR000922 GO:0030246
Ahy18g0230 845 Pfam Glycosyl hydrolases family 35 39 343 IPR031330 -
Ahy18g0230 845 Pfam Beta-sandwich domain in beta galactosidase 351 422 IPR041392 -
Ahy18g0230 845 Gene3D - 761 845 IPR043159 -
Ahy18g0230 845 PANTHER BETA-GALACTOSIDASE 10 839 - -
Ahy18g0230 845 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Ahy18g0230 845 SUPERFAMILY Galactose-binding domain-like 406 577 IPR008979 -
Ahy18g0230 845 ProSiteProfiles SUEL-type lectin domain profile. 759 845 IPR000922 GO:0030246
Ahy18g0230 845 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 177 189 IPR019801 GO:0004553|GO:0005975
Ahy18g0230 845 SUPERFAMILY (Trans)glycosidases 31 348 IPR017853 -
Ahy18g0230 845 Gene3D Glycosidases 28 348 - -
Ahy18g0230 845 PANTHER BETA-GALACTOSIDASE RELATED 10 839 IPR001944 GO:0004553|GO:0005975
Ahy18g0230 845 Gene3D - 607 735 - -
Ahy18g0230 845 SUPERFAMILY Galactose-binding domain-like 586 751 IPR008979 -
Ahy18g0230 845 PRINTS Glycosyl hydrolase family 35 signature 63 81 IPR001944 GO:0004553|GO:0005975
Ahy18g0230 845 PRINTS Glycosyl hydrolase family 35 signature 254 269 IPR001944 GO:0004553|GO:0005975
Ahy18g0230 845 PRINTS Glycosyl hydrolase family 35 signature 118 137 IPR001944 GO:0004553|GO:0005975
Ahy18g0230 845 PRINTS Glycosyl hydrolase family 35 signature 291 306 IPR001944 GO:0004553|GO:0005975
Ahy18g0230 845 PRINTS Glycosyl hydrolase family 35 signature 175 190 IPR001944 GO:0004553|GO:0005975
Ahy18g0230 845 PRINTS Glycosyl hydrolase family 35 signature 311 327 IPR001944 GO:0004553|GO:0005975
Ahy18g0230 845 PRINTS Glycosyl hydrolase family 35 signature 622 636 IPR001944 GO:0004553|GO:0005975
Ahy18g0230 845 PRINTS Glycosyl hydrolase family 35 signature 649 665 IPR001944 GO:0004553|GO:0005975
Ahy18g0230 845 PRINTS Glycosyl hydrolase family 35 signature 42 59 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0230 Ahy-Chr18 1829324 1834885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0230 5 844 Glycoside Hydrolase AT3G13750 78.810 0.0 1429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0230 - - gmx:100811187 1611.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0230 18 1829324 1834885 Ahy18g0230 18 1829324 1834885 ECH
Ahy18g0230 18 1829324 1834885 Ahy8g1019 8 24977562 24983208 hybridization
Ahy18g0230 18 1829324 1834885 Ahy9g0449 9 5731790 5738260 PCT
Ahy9g0449 9 5731790 5738260 Ahy18g0230 18 1829324 1834885 PCT