Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0208 ATGATGATGGGTTTGGTCAAATGGGTCAACTTGTTCATCATATTTCATTTGTTTGGTGCTGCAACAACAACAAAACCCATCATGGCAGCCTCAGATTCTTCCAAGTTTCTGAATTTGGCGAAGGAACCTTGGGTATTTGATTGGATGGTTGAGATCAGGAGGAAGATTCATGAGAATCCAGAACTGGGGTATGAGGAATTTAAGACAAGTGAGCTTGTAAGGACCGAATTGGACAAGCTTGGGATCCCATACAAATACCCAGTTGCGGTAACAGGTGTTATTGCTTTCATAGGAACAAAAAAGCCTCCTTTTGTTGCAATTAGAGCTGACATGGATGCTCTCCCTATGCAGGGAACTGTAGTTCTTGTTTTTCAACCTGCAGAGGAAGGAGGTGGAGGGGCTAAGGAAATTTTAGATGCTGGAGCCTTAGAAAATGTTTCTGCCATATTTGGATTGCATGTCGCACCGAAGTTACCTATAGGCGTAGTGGCATCTAGATCTGGTTCTTTCTTTGCCGGAAGCGGCTTCTTTGAAGCAATAATAAGTGGCAAGGGAGGTCATGCAGCCATTCCTCAGCATTCTATAGACCCCATATTGGCAGCTTCTAATGTGATTGTTAGCTTACAACATATCATTTCTCGCGAGGCCGATCCTCTGGATTCCCAGGTTGTGACGGTAGCGAAATTCCAAGGAGGTGGTGCATTCAACGTTATTCCAGATTCTGTCACAATTGGTGGGACTTTCCGAGCTTTCTCAACAGGAAGTTTTATGCAACTGAGACAGCGGATTGAGCAGGTTATCACTAAGCAAGCTTCCGTGCAAAGGTGCAATGCAACGGTCAGCTTTCTCGACGACAAGCCTTTCTTCCCTCCAACTGTAAACCATGCAGAATTGCATGACTATTTCCAAAGTGTAGCCGGAAGCGTGCTCGGCGGCGATAAAGTGATTGACATACAACCATTGATGGGATCGGAGGACTTTTCGTTCTACCAACAGGTCATTCCCGGTTACTTCTTCCTCCTTGGAATGGAGAACACGGCGGTTGAACACCTCGAATCGCCGCACTCTCCCCATTTCAAAGTAAACGAAGATGCACTCCCTTATGGAGCTGCACTTCATGCTTCATTAGCTGCTAACTATCTTCTCAAAATTCATCAAGACTTGCCAGTGGTAAAGGAGAAACACCATGATGAATTATAA 1200 0.45 MMMGLVKWVNLFIIFHLFGAATTTKPIMAASDSSKFLNLAKEPWVFDWMVEIRRKIHENPELGYEEFKTSELVRTELDKLGIPYKYPVAVTGVIAFIGTKKPPFVAIRADMDALPMQGTVVLVFQPAEEGGGGAKEILDAGALENVSAIFGLHVAPKLPIGVVASRSGSFFAGSGFFEAIISGKGGHAAIPQHSIDPILAASNVIVSLQHIISREADPLDSQVVTVAKFQGGGAFNVIPDSVTIGGTFRAFSTGSFMQLRQRIEQVITKQASVQRCNATVSFLDDKPFFPPTVNHAELHDYFQSVAGSVLGGDKVIDIQPLMGSEDFSFYQQVIPGYFFLLGMENTAVEHLESPHSPHFKVNEDALPYGAALHASLAANYLLKIHQDLPVVKEKHHDEL* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0208 399 SUPERFAMILY Bacterial exopeptidase dimerisation domain 172 290 IPR036264 -
Ahy18g0208 399 PIRSF Amidohydrol_AmhX 115 384 IPR017439 GO:0016787
Ahy18g0208 399 PIRSF Amidohydrol_AmhX 34 119 IPR017439 GO:0016787
Ahy18g0208 399 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 4 116 399 - -
Ahy18g0208 399 Gene3D Zn peptidases 117 366 - -
Ahy18g0208 399 Gene3D Zn peptidases 27 116 - -
Ahy18g0208 399 PANTHER PEPTIDASE M20 FAMILY MEMBER 3 117 IPR017439 GO:0016787
Ahy18g0208 399 Pfam Peptidase dimerisation domain 173 271 IPR011650 -
Ahy18g0208 399 Gene3D - 172 289 - -
Ahy18g0208 399 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 4 3 117 - -
Ahy18g0208 399 Pfam Peptidase family M20/M25/M40 116 378 IPR002933 GO:0016787
Ahy18g0208 399 PANTHER PEPTIDASE M20 FAMILY MEMBER 116 399 IPR017439 GO:0016787
Ahy18g0208 399 TIGRFAM amidohydrolases: amidohydrolase 117 368 IPR017439 GO:0016787
Ahy18g0208 399 SUPERFAMILY Zn-dependent exopeptidases 45 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0208 Ahy-Chr18 1661730 1665109 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0208 K21604 - gmx:100794121 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0208 18 1661730 1665109 Ahy18g0208 18 1661730 1665109 ECH
Ahy18g0208 18 1661730 1665109 Ahy9g0375 9 4360278 4365893 PCT
Ahy9g0375 9 4360278 4365893 Ahy18g0208 18 1661730 1665109 PCT