Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0135 ATGCTCCTCACCGTGAGAGTGCACAACGCCGGCGTGTACTCCCTCGATTTCGGAGGGGTTGACGTGGCGGTGTCTTACAGAGGAAAGAGGCTGGGGCACGTGATATCGGAGCACGGTCACGTGAGTGCCAGGGGTTCGTCCTACGTGGACGCTGACGTGGAATTCGCGGGAATCGCGGTGGTGCCTGAGATGATGCTGTTTCTAGAAGACCTTGCAAAGGGTGCAATTCCCTTCTTTACGGTTTCCCAGGTCAACGGTCAAATGGGCCTTGCCTTCTTTCACTTCCCCATTCAGGCAAAACTATCATGTGAAGTATTGGTGAGTACAGTAAACCAGACAATTATTCACCAACATTGTCTCCATGAGGGGCACATTGGGAAGAAACTATAA 390 0.5205 MLLTVRVHNAGVYSLDFGGVDVAVSYRGKRLGHVISEHGHVSARGSSYVDADVEFAGIAVVPEMMLFLEDLAKGAIPFFTVSQVNGQMGLAFFHFPIQAKLSCEVLVSTVNQTIIHQHCLHEGHIGKKL* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0135 129 Pfam Late embryogenesis abundant protein 4 102 IPR004864 -
Ahy18g0135 129 PANTHER EXPRESSED PROTEIN 1 121 - -
Ahy18g0135 129 SUPERFAMILY LEA14-like 2 70 - -
Ahy18g0135 129 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 1 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0135 Ahy-Chr18 984598 985215 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0135 - - adu:107459529 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0135 18 984598 985215 Ahy18g0135 18 984598 985215 ECH
Ahy18g0135 18 984598 985215 Ahy7g2175 7 80134274 80134891 hybridization
Ahy18g0135 18 984598 985215 Ahy9g0197 9 2082352 2084517 PCT
Ahy9g0197 9 2082352 2084517 Ahy18g0135 18 984598 985215 PCT