Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0116 ATGCCTTCACTCTCCGAAGCCTACCATTCCCACCCTGTGGAGGTTCACCACCACAAGCACCCTGATTTCAAGTCCCTTCAAGAATTACCGGATTCGTACGCTTGGACACACCCAGAAGATCATGCTCTCGCCATCAATACTACTTCTTCCAACTTTGGTAGCGTTCCGGTCATTGACCTATCTGACCGGAACGCAACCAGGCTTATAGGGCATGCATGCAGGACCTGGGGTGCTTTCCAGGTCGTGAATCATGGGGTGCCCTTAAGCCTCCTTGACCACATTCAGTGGGTCGGTCAGACTCTCTTCTCACTCTCGACTCACCAAAAGCTCAAAGCCACTCGCTCTCCAGATGGAGTGACCGGCTATGGCCTCGCACGCATCTCCTCCTTCTTCCCCAAGCTCATGTGGTCCGAGGGCTTCACCATCCTTGGATCCCCTCTTGAACATTTCCAAAAACTCTGGCCCCAGGATTACGCTAAATACTGTGATATTGTCGTGGAATATGATGAAACCATGAAAAAGCTAGCGGGAAAGTTAATGGGCCTCATGTTGGACTCTCTCGGCATTTCAAAGGAGGAACTCAAATGGGCCTGCCCCAATAAGGGCCCATTATTCAAAGACACATGCGGTGCCTTGCAATTAAACTCCTACCCGACTTGTCCGGATCCGGATCGCATGGGGCTTGCCCCGCATACCGATTCCACCCTCCTCACAATCCTTTACCAAAACAACATCAGCGGGTTGCAGGTTCACCGGGAGAGCACCGGGTGGGTGACGGTGCCGCCGATCCCTGGTGCTCTCGTGGTAAACGTCGGCGACCTCTTCCACATTTTGTCAAACGGGTTATACCCGAGTGTGCTCCATCGGGTTCTGGTGAATCGGAGCAAGCAGCGGTTTTCGGTTGCCTACCTATATGGGCCCCCATCGAATGTAGAGATATGTCCACATGCGAAGCTAGTGGGCCCAACTAGGCCTGCTCTCTATAGGGCAGTGACTTGGAATGAGTACCTTGGCACCAAAGCAAAGCACTTCAATAAAGCACTCTCTTCCTTTCAACTATGTGCACCTAAAAACGGTTTGTTTGATGTAAACGAGTCTCACAAAAATAGTGTCCAAGTGGGTTAA 1125 0.5156 MPSLSEAYHSHPVEVHHHKHPDFKSLQELPDSYAWTHPEDHALAINTTSSNFGSVPVIDLSDRNATRLIGHACRTWGAFQVVNHGVPLSLLDHIQWVGQTLFSLSTHQKLKATRSPDGVTGYGLARISSFFPKLMWSEGFTILGSPLEHFQKLWPQDYAKYCDIVVEYDETMKKLAGKLMGLMLDSLGISKEELKWACPNKGPLFKDTCGALQLNSYPTCPDPDRMGLAPHTDSTLLTILYQNNISGLQVHRESTGWVTVPPIPGALVVNVGDLFHILSNGLYPSVLHRVLVNRSKQRFSVAYLYGPPSNVEICPHAKLVGPTRPALYRAVTWNEYLGTKAKHFNKALSSFQLCAPKNGLFDVNESHKNSVQVG* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0116 374 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 367 - -
Ahy18g0116 374 Pfam 2OG-Fe(II) oxygenase superfamily 212 307 IPR044861 -
Ahy18g0116 374 Pfam non-haem dioxygenase in morphine synthesis N-terminal 55 155 IPR026992 -
Ahy18g0116 374 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 207 307 IPR005123 -
Ahy18g0116 374 SUPERFAMILY Clavaminate synthase-like 15 344 - -
Ahy18g0116 374 PANTHER GIBBERELLIN 3-BETA-DIOXYGENASE 1-LIKE 3 367 - -
Ahy18g0116 374 Gene3D - 19 347 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0116 Ahy-Chr18 811359 813225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0116 51 348 Glycosyltransferase AT5G59530 33.657 4.05e-39 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0116 K04124 - gmx:100798572 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0116 18 811359 813225 Ahy18g0116 18 811359 813225 ECH
Ahy18g0116 18 811359 813225 Ahy7g2194 7 80306264 80308130 hybridization
Ahy18g0116 18 811359 813225 Ahy9g0158 9 1535856 1539204 PCT
Ahy9g0158 9 1535856 1539204 Ahy18g0116 18 811359 813225 PCT