Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0112 ATGGTTTCTTCAACCACTGAGACAAAAACCAGAGCCAACAAGTTCCTTAACACTGCAGTAATGATGAACAATGACAACCATTCCTGCCACCAACATCATGAAGAAGAAGAAGAAGAAGAAGAAACGCATTGCTGGTTTGATGGTGCATGCATTCTGGACATGGACTACTTCGTGAAGACCCTCTCAGGAATCAAGCAAAAGGGTGTTCGTTCTGATTTGATAGGATCAATCATAACTCATTATGCTTCCAAATGGCTCCCTGACCTTTCTTCTTCAACTGACATCTTTTCTGATAACAAGGATCGTCTTACATCACCAGAGAGTGTCACAGCTTCATGGCTAAAGAAGAGGTTCTTTGTTGAAACCTTGGTTGGTGTTCTTCCACCAGAGAAAGATTCCATTCCATGCAACTTCCTCCTTAGGCTCCTAAGAACAGCTAACATGGTTGGGGTTGAGGGAAGTTACAGGTTAGAGCTTGAGAAGCGGATTTCATGGCAGCTAGACCAGGCTTCATTGAAGGAGCTTATGATACCTTCGTTTAGCCACACTTGTGGGACACTGCTTGATGTTGAAATTGTGATAAGGTTGGTGAAGAGGTTCGTGTGCTTGGACCATGAAGGTGTTAAGAGTGGTGCTGCTTTGATTAAGGTGGCTAAGCTGATTGATTCCTACCTTGCTGAGGTTGCTTTAGATGCTAATCTCACCTTGTCTGAGTTTGTTTCACTCGCTGGAGCTCTTCCAACTCATGCAAGAGCCACTGATGATGGCTTGTACAGAGCCATTGATACTTATCTCAAAGCACATCCAAGTGTGTCAAAGCAAGAAAGGAAGGGTCTGTGTAGGCTTATTGATAGCAGAAAACTCACACCAGAGGCCTCACTTCATGCAGCTCAAAATGAACGGTTACCTGTGAGAGCTGTTATTCAAGTTCTCTTCTCTGAACAAACTAAGCTAAACCGCCATTTGGACTGGAGTAGTGGCTCCTTCAGTGGCCTCAGGAGCCCCTGCAATGGCAGCTTAGACACGCCTTTACGGTGCCTGTCAAAGCGCGAAATGAGTGCTCAGCAGATGGAGATAAGGAAGCTGAAAGAAGAGGTTTATAGGCTGCAAAACCAGTGCAATGCAATGCAAGTGCAGCTGGAGAGAATGGTGGAGAAGAAGAAAGGTTTGTTCTTCAAGTTGAAGAAGTTTGGTATTGGTAATAGAAGCAGCAGCATTGTGGGAGAGGTAGAGAAGATTATGGAACAAGAGAGTGGCAGGTTTGGAAGGGAAACGCCAATGGACTTAAAAAGTGGTGTGTTAGGTGTTATGACTCCTCACAAGTGGAGGAAATCTACCTCCTGA 1344 0.4479 MVSSTTETKTRANKFLNTAVMMNNDNHSCHQHHEEEEEEEETHCWFDGACILDMDYFVKTLSGIKQKGVRSDLIGSIITHYASKWLPDLSSSTDIFSDNKDRLTSPESVTASWLKKRFFVETLVGVLPPEKDSIPCNFLLRLLRTANMVGVEGSYRLELEKRISWQLDQASLKELMIPSFSHTCGTLLDVEIVIRLVKRFVCLDHEGVKSGAALIKVAKLIDSYLAEVALDANLTLSEFVSLAGALPTHARATDDGLYRAIDTYLKAHPSVSKQERKGLCRLIDSRKLTPEASLHAAQNERLPVRAVIQVLFSEQTKLNRHLDWSSGSFSGLRSPCNGSLDTPLRCLSKREMSAQQMEIRKLKEEVYRLQNQCNAMQVQLERMVEKKKGLFFKLKKFGIGNRSSSIVGEVEKIMEQESGRFGRETPMDLKSGVLGVMTPHKWRKSTS* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0112 447 Coils Coil 352 379 - -
Ahy18g0112 447 Pfam NPH3 family 44 293 IPR027356 -
Ahy18g0112 447 PANTHER OS12G0117600 PROTEIN 41 447 IPR043454 -
Ahy18g0112 447 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 41 447 - -
Ahy18g0112 447 ProSiteProfiles NPH3 domain profile. 43 317 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0112 Ahy-Chr18 771677 775874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0112 45 322 EF-hand Containing Proteins AT3G44820 37.705 1.27e-53 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0112 - - gmx:100777820 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0112 18 771677 775874 Ahy18g0112 18 771677 775874 ECH
Ahy18g0112 18 771677 775874 Ahy7g2198 7 80343613 80346722 hybridization
Ahy18g0112 18 771677 775874 Ahy9g0150 9 1449369 1452723 PCT
Ahy9g0150 9 1449369 1452723 Ahy18g0112 18 771677 775874 PCT