Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0083 ATGGGGGCGGTGGTGCAGCGGTTGTGGTTGCTCCGTTCGCACAGAGCTCCCATATCACTACTACGGAGCTCAGATACGACGTCGTTGGCGAGATGTTTGAGCTCCAAAGCAGGGTCAGGGTGGTTTCGCGGGCTCGAAAGGAACAAGAAGTCGAAACTGCCCTCCATTATGAAAGCTGGAGAACCGGTTCTGCACGAGCGTGCAATGGAAGTGAATGTGAAGGAGATAAAGTCAGAAAAAGTGCAGAGTATTATCGATGACATGATCAAGGTCATGAGGAAAGCCCCTGGTGTTGGCCTGGCTGCTCCTCAGATTGGAATCCCCTTTAGGATAATTGTTTTGGAAGATAAAGAGGAATATATTGGTCTTGACACTAAGGAAGAGGCTGAAGCTCAAGATAGAAGACCTTTTGATCTCTTGGTTATCTTGAATCCTAAGCTAAAGAACAAGACCAACAGGACAGCCCTTTTCTTTGAAGGCTGCTTGAGTGTTAATGGATTTCTAGGTGTTGTGGAGCGTTACCTCAATGTTGAGGTATCGGGTTATGATCGTCATGGTGAGCCTATCAAAATAAATGCTACAGGTTGGCAGGCTCGGATTTTACAGCACGAGTGCGATCATCTGGATGGAACTCTCTATGTTGATAAGATGCTACCTAAAACTTTCAGAACTGCCGAAAACCTGGACTTGCCTCTTGCCTGTGCCTGCCCAAAACTTGGTTCCCGCTAA 729 0.4719 MGAVVQRLWLLRSHRAPISLLRSSDTTSLARCLSSKAGSGWFRGLERNKKSKLPSIMKAGEPVLHERAMEVNVKEIKSEKVQSIIDDMIKVMRKAPGVGLAAPQIGIPFRIIVLEDKEEYIGLDTKEEAEAQDRRPFDLLVILNPKLKNKTNRTALFFEGCLSVNGFLGVVERYLNVEVSGYDRHGEPIKINATGWQARILQHECDHLDGTLYVDKMLPKTFRTAENLDLPLACACPKLGSR* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0083 242 PANTHER PEPTIDE DEFORMYLASE 33 242 - -
Ahy18g0083 242 Gene3D Peptide deformylase 52 241 IPR036821 -
Ahy18g0083 242 CDD Pep_deformylase 56 213 IPR023635 GO:0042586
Ahy18g0083 242 Hamap Peptide deformylase [def]. 52 228 IPR023635 GO:0042586
Ahy18g0083 242 TIGRFAM pept_deformyl: peptide deformylase 63 220 IPR023635 GO:0042586
Ahy18g0083 242 PRINTS Peptide deformylase signature 86 115 IPR023635 GO:0042586
Ahy18g0083 242 PRINTS Peptide deformylase signature 190 219 IPR023635 GO:0042586
Ahy18g0083 242 PRINTS Peptide deformylase signature 171 189 IPR023635 GO:0042586
Ahy18g0083 242 PRINTS Peptide deformylase signature 159 170 IPR023635 GO:0042586
Ahy18g0083 242 Pfam Polypeptide deformylase 55 219 IPR023635 GO:0042586
Ahy18g0083 242 PANTHER PEPTIDE DEFORMYLASE 33 242 IPR023635 GO:0042586
Ahy18g0083 242 SUPERFAMILY Peptide deformylase 53 224 IPR036821 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0083 Ahy-Chr18 544770 546774 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0083 K01462 - csv:101216450 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0083 18 544770 546774 Ahy18g0083 18 544770 546774 ECH
Ahy18g0083 18 544770 546774 Ahy7g2227 7 80572714 80574717 hybridization
Ahy18g0083 18 544770 546774 Ahy9g0134 9 1310194 1313272 PCT
Ahy9g0134 9 1310194 1313272 Ahy18g0083 18 544770 546774 PCT