Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0059 ATGCTTGGTCTGGGTGCGGACCTCTTGTGGGCCGACATGAACCGCCTACTGGGCTTCCTCTTCCACCAGGGAGTGCTGGACGAGCACTTCTTGCAGCTTCACCACCTCCAGGACGAGTCCTCCCCAAGCTTCGTCTCCGAGGTGCTCAACATCTACTTCCACGAGTCTGAGAAGCTTCTCAACAATCTCAGATCATTGCTCATGGATAGGGACTTCTCCGACTACAACAAAATGGGAATCCATTTGAATCAATTCATGGGAAGCAGCTCCAGCATTGGCGCCAAGAGACTCACCACTGTCTGCCTTGCCTTTCGTGCTGCTACTCAACACAGTAACCGTCCTGGATGCCTTCGAGCCTTGGAGATGCTGGAACATGAATATTGCTATCTCAAGAACAAACTGCATGAACTATTCCAAATAGAGCAGCAACGTGCTTTGGCAGCAGCAGCCAGATACCCACTGCAGAATAACCAATAA 477 0.5094 MLGLGADLLWADMNRLLGFLFHQGVLDEHFLQLHHLQDESSPSFVSEVLNIYFHESEKLLNNLRSLLMDRDFSDYNKMGIHLNQFMGSSSSIGAKRLTTVCLAFRAATQHSNRPGCLRALEMLEHEYCYLKNKLHELFQIEQQRALAAAARYPLQNNQ* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0059 158 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 9 143 IPR036641 GO:0000160
Ahy18g0059 158 Pfam Hpt domain 47 121 IPR008207 GO:0000160
Ahy18g0059 158 Gene3D HPT domain 4 156 IPR036641 GO:0000160
Ahy18g0059 158 PANTHER PSEUDO HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 6 1 152 - -
Ahy18g0059 158 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 41 137 IPR008207 GO:0000160
Ahy18g0059 158 PANTHER - 1 152 IPR045871 GO:0000160|GO:0009927|GO:0043424
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0059 Ahy-Chr18 413950 415219 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0059 K14490 - gmx:100789608 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0059 18 413950 415219 Ahy18g0059 18 413950 415219 ECH
Ahy18g0059 18 413950 415219 Ahy7g2250 7 80704265 80705539 hybridization
Ahy18g0059 18 413950 415219 Ahy9g0131 9 1243831 1245674 PCT
Ahy9g0131 9 1243831 1245674 Ahy18g0059 18 413950 415219 PCT