Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3253 ATGGATTCTGCGACGCCAACACACACTCACAGCTCCAAATCCCAGCCTCCGTTCGCCGTCGCCGAGAAGGTCCTCGCTAAACACAAAGGTCGATTTTACGAAGCCAAGGTTAGGCAGGTCGAATTCAAAGAGGGCCAGTGGCGCTGTTTTGTTCATTATTTGGGTTGGAAGAAAAGCTGGGATGAATGGCTTGCAACTGATTGTTTGATGAAAGACACAGAGGAGAATATGCAGATAAAGCTCGCCATTGATGAGAAATTTGGTCATGACAAAAGTACAAAGATTCACCGTGCATCCTTCAACAAACCAAAGACTCCTAACAATGAAAGCAGAGGCAGGAAACGAAAGAGTGAAACTCCAATTAAGGAAAAACCAGAGGTCCCTCCTGACAAGCTTGTCAGCATTCAGATTCCACCAACTCTAAGGAAGCAATTAGTTGATGATTGTGAATTTATCACCCATCTGGGCAAGCTTGTTAAACTTCCTCGCACCCCTAATGTGAATGACATAATGAAGAATTATTTTGATTACAGATTGAAGAAATGTGGCTCGATATCAGATTCAGTTGAAGAAATTTTGAAAGGATTGTGTTGTTACTTTGATAAAGCACTGCCGGTGAAGCTTTTGTACAAGAATGAGCGTCAACAGTACCAAGAAGCATGTCCTGATAATACCACTCCTTCCACTGTATATGGTGCTGAGCATTTGTTACGTCTATTTGTTAAGTTGCCTGAGCTGTTGTCCCATGCTAGCATTGAAGAGGAGTCGATGACAGAACTCCAAGCCCAATTAGTTGACATTCTAAGGTTCTTGCAAAGAAATCAGAGTACATATTTCCTTTCTACTTATCATGTCCCTGATGATATTGAGAACAGCACCAACAAACAAGGTGACTAG 897 0.4225 MDSATPTHTHSSKSQPPFAVAEKVLAKHKGRFYEAKVRQVEFKEGQWRCFVHYLGWKKSWDEWLATDCLMKDTEENMQIKLAIDEKFGHDKSTKIHRASFNKPKTPNNESRGRKRKSETPIKEKPEVPPDKLVSIQIPPTLRKQLVDDCEFITHLGKLVKLPRTPNVNDIMKNYFDYRLKKCGSISDSVEEILKGLCCYFDKALPVKLLYKNERQQYQEACPDNTTPSTVYGAEHLLRLFVKLPELLSHASIEEESMTELQAQLVDILRFLQRNQSTYFLSTYHVPDDIENSTNKQGD* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3253 298 Gene3D - 2 99 - -
Ahy17g3253 298 MobiDBLite consensus disorder prediction 94 127 - -
Ahy17g3253 298 MobiDBLite consensus disorder prediction 107 127 - -
Ahy17g3253 298 SUPERFAMILY Chromo domain-like 11 153 IPR016197 -
Ahy17g3253 298 PIRSF EAF3_MRG15 11 296 IPR008676 GO:0005634|GO:0006325|GO:0006355
Ahy17g3253 298 ProSiteProfiles MRG domain profile. 129 296 IPR026541 -
Ahy17g3253 298 Pfam RNA binding activity-knot of a chromodomain 20 67 IPR025995 -
Ahy17g3253 298 PANTHER CHROMATIN-BINDING PROTEIN 11 297 - -
Ahy17g3253 298 Gene3D MRG domain 129 296 IPR038217 -
Ahy17g3253 298 PANTHER MORTALITY FACTOR 4-LIKE PROTEIN 11 297 IPR008676 GO:0005634|GO:0006325|GO:0006355
Ahy17g3253 298 Pfam MRG 114 283 IPR026541 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3253 Ahy-Chr17 134647034 134651277 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3253 K11339 - gmx:100777259 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3253 17 134647034 134651277 Ahy17g3253 17 134647034 134651277 ECH
Ahy17g3253 17 134647034 134651277 Ahy8g0971 8 18660775 18664924 hybridization