Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3252 ATGAAGCGTCCGATCCCCGGCGACGGAGACGGCGACCTCCTCAAGATGAAGAAGGTTAAGGTGGACGGCGATGCCGACGCCGACGCCGAAGAGAATTGTGTCCTCCGGGGGATGCGGTATTTCGATGACAACGTGCTGTTCGAGGTGCTGAAGCACGCGGACGCGAGGACGCTGGCTATGGCGAGCTGCGTTAACAAGCAGTGGCACAAAACTGCACAGGATGAGAGGCTTTGGGAGCTGATCTGCACCAAACAGTGGGCAAACACCGGCTGCGGCGAGGAACAGCTCCGATCCGTCGTCCTTGCCCTCGGCGGTTTCCGTCGTCTCCACTCCCTTTACCTAAGGCCTCTCTCTAAGCCATACTCTTCTTCATCGTCATCGTCATCGTCATCGTCATCTCCCACTTCCTCCTCCGTTTGGGGTCCCATCTCTCAGGCGCCGGTGGCTCCTCGGCCGAAGCCCTTGCCTCCTCGTTTGGGTAAAGACGCCGTACACCTCTCCCTCTCCCTCTTATCCATTCGCTTCTACGAGAAGATGTCTAATTTCAACAACCGAAGCAGATGA 564 0.5762 MKRPIPGDGDGDLLKMKKVKVDGDADADAEENCVLRGMRYFDDNVLFEVLKHADARTLAMASCVNKQWHKTAQDERLWELICTKQWANTGCGEEQLRSVVLALGGFRRLHSLYLRPLSKPYSSSSSSSSSSSSPTSSSVWGPISQAPVAPRPKPLPPRLGKDAVHLSLSLLSIRFYEKMSNFNNRSR* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3252 187 SUPERFAMILY F-box domain 40 87 IPR036047 GO:0005515
Ahy17g3252 187 Coils Coil 187 187 - -
Ahy17g3252 187 PANTHER F-BOX ONLY PROTEIN 48-RELATED 1 186 IPR045118 GO:0019005|GO:0031146
Ahy17g3252 187 MobiDBLite consensus disorder prediction 119 143 - -
Ahy17g3252 187 MobiDBLite consensus disorder prediction 119 157 - -
Ahy17g3252 187 Pfam F-box-like 44 84 IPR001810 GO:0005515
Ahy17g3252 187 PANTHER F-BOX DOMAIN-CONTAINING PROTEIN-RELATED 1 186 - -
Ahy17g3252 187 Gene3D - 34 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3252 Ahy-Chr17 134634069 134635193 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3252 K14495 - gmx:100801734 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3252 17 134634069 134635193 Ahy17g3252 17 134634069 134635193 ECH
Ahy17g3252 17 134634069 134635193 Ahy8g0970 8 18607544 18608853 hybridization