Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3242 ATGAGAGAAGCAGATGCATCTCTTAGAAGAGTTGGAATCTCCAACTGCTTCAAAGAAATGCCTCTATGTGAGGATAAAGAAGATTATGATCAATATGTGTTGGTGCTGAGTGAACTATGGCACATTGCCATGACTCAATCCAACGACCCTGAGTTCCCTTCCCTTGGCATATTCAAGTGCATGGCTAACCTAATCAACAAAGCTATAAACAACAAAACCTGGCTTCTCACAAATCAAAACATATACATACCCTACTATGCTGCTCATATCATTGGATCTTACACCATGAACAAGGAAGAGTTTGCACAAATAGCTGTGCAATCAGGTGTTATACCTCCATTGTTAGAGCTTCTGAGGGGGAAAATCAGTTGGGTTGAACAAAGGGTTGCGGTTCGAGCATTAGGGCACTTGGCCAGTTATGAAAGCACATTCGATTCGGTATCGGAGTATGAACAAGAAGTGGTGAAAGTGACATTGAATCTAGCATGTACTTGCTTGGAAGTGGTGTATTCTGAGTTTGTAGGAGTGAAGAAGAAGAAGAGGGTAGAGTACCACAGGAACTTGCTTACAAGAGGTGTTGGTGATTTGGAGATGGAGAACCGAAAAGCTGAGGAATGGGGTAGCCAACTTCAGTGTTGGTGTATTCATCTTCTCAACTGTTTTGCTTTCAAAGAAAGATGTCTGAATCTGATTTGTCAGAAGGAGTTCTTGAAGCAACTTTGCCACATGTGGGGTGGGTTGGTGAATCACACGTCACCAGGTGGTGTTGGACTCCTTCGAATCCTGTGTTACAGTAAATTTGGAAGGAAAATCATTGCTGAGATCCCAAAAGTAATCATCAATCTCGGTAACATTTCAAGATCTTCGGATGATTGGCAGTATATGGCGATTGATTGTCTTTTACTTCTTCTCAAGGACTCAGATACAAGGTTCAAGGTTATTGATCTTGCTGCTTCGTACCTTGTTGATTTGGTTGAACTTAAAAGCCTTGGAGATAAATCAAACGTGGGTGAAACCATCACAAAAGTGCTGCTACTTGAGGAACATAAATTCAACAACAACAGGGACTTGCAACAAGTGCTGAATTTGAAGGTGTATAGGAGGAAGAAAGAGAAGGCGTTGTGGGAAGAGAAATTAGAGGAAAGAAGGGTTTTGGTTGGTTTGATAAAGCAAGAAGCGAATCACATGTTGAGGTTGGGAAAAGTAGAAGAAGCTTTGGTGAAGTACAATGAAGCACTTGAAGTTTGTCCATTGAAGTTGAGAAAGGAGAGAATGGTGCTTTATAGTAACAAAGCACAGTGCAATCTTGTGCTTAAGAATCCAGAAAGTGCAATCAGTGATTCAACGAGAGCGCTTTGCCTTTCGAACCCAGCGAACACGCACAGGAAAAGCCTCTGGAGAAGGTCACAGGCTTATGACATGAAAGGCATGGCGAGGGAGAGCCTTTTGGACTGCATAATGTTCATGAACAGTTGCATCATCAAGTTAAATAATAATGGCGATGATGATGATGATTGCAACAACAAGAAGCAGCACCAGCACCAGCAGCGGAGTCTCAAGATTCCTTACCACGCAGCGCGCATGATCTGCAAACACATGGATGCCACGTGGCTCTTTGCTGCTGCACGCTCGTCAAGGCTAATAAGAGTGATGGAAAAGAAAAAAAATCATCACTCTAATCATGAAAATGAAGCCAACAACTGTGAACTGAACTTCCATGATCGTAACAGTGGTGGTCTCATGCCTGGGTTGTCCACCATTAATGAAGAACCTTTTGCGGCAAAAGAAGTGAGTAGGAGAAAGTTAGAGGCCATAAAAGATGAGCTTAAATCAATGGAACAAAATAAAGTATGGAATCTTGTGGAATTACCTAAAGGATGCAAGAGAATTGGGTGTAAATGGGTCTTTAAGACTAAGCGTGATTCTCATGGCAACCTTGAACATTACAAGGCTCGTCTTGTTGTCAAAGGTTTTACTAAAAAAGATGGCATTGATTACAAAAAGACTTTCTCACCAGTTTCTAGAAAAGACTCTTTAAGGATTATCTTGGCTTTGGTAGCTCATTATGACTTAGAGTTTCATCAAATAGATGTAAAAACTGCCTTTTTTAATGGGGATTTAGAGGAAGATGTTTACATGAATCAACCAACAAATTTTTTTGTTGAAGAAAAAGAACAAATGGAGAATACTGTTGATCGTTGTATATACTTGAAGGTCAGTGGGAGTAAATTTATTGTTTTAGTTCTATATGTTGATGATGTTTTGCTTGCATCTAATGATCTTGGTCTATTAAGCGAGACTAAAAAATATCTCTCTAATAATTTTGAAATGAAAGATATGGATGAGATGGAAAGAATTCCATATGCATCTATTGTTGGAAGTTTGATGTATGCTCAGACTTGCACAAGGTCAGATATCAGCTTTGCAGAGTTAGGGTATACAACATACAAGGAGATGTATTGGTTTGACAACACTGCTGATGACATGGAAGCTGGGATACATGTTATTAAAGGTGATGCTGAGATAAATGAACTGAGGGATGCTCAGAAGAGAAATAAGGGCAACAATGAATTTTATCTTTACTTTGATCACCTGATAGATGTCCCTAAAGTTGTTGATGATGGTGTGGAGTGTGATACTATTGTGCTGAGTGAATCATCATCATCTTCAGATGATGGATACGAGACCACAGAAAATGAGCCTTATAAGTCTCTTTCTTCTGGTTTTGAGGATACAGACAGCAGTGATGAGAGTTTGGAAAAGAAAAAAAATTCAGAAGAAGAAGAAGAGAGTTTCACCTAA 2802 0.3983 MREADASLRRVGISNCFKEMPLCEDKEDYDQYVLVLSELWHIAMTQSNDPEFPSLGIFKCMANLINKAINNKTWLLTNQNIYIPYYAAHIIGSYTMNKEEFAQIAVQSGVIPPLLELLRGKISWVEQRVAVRALGHLASYESTFDSVSEYEQEVVKVTLNLACTCLEVVYSEFVGVKKKKRVEYHRNLLTRGVGDLEMENRKAEEWGSQLQCWCIHLLNCFAFKERCLNLICQKEFLKQLCHMWGGLVNHTSPGGVGLLRILCYSKFGRKIIAEIPKVIINLGNISRSSDDWQYMAIDCLLLLLKDSDTRFKVIDLAASYLVDLVELKSLGDKSNVGETITKVLLLEEHKFNNNRDLQQVLNLKVYRRKKEKALWEEKLEERRVLVGLIKQEANHMLRLGKVEEALVKYNEALEVCPLKLRKERMVLYSNKAQCNLVLKNPESAISDSTRALCLSNPANTHRKSLWRRSQAYDMKGMARESLLDCIMFMNSCIIKLNNNGDDDDDCNNKKQHQHQQRSLKIPYHAARMICKHMDATWLFAAARSSRLIRVMEKKKNHHSNHENEANNCELNFHDRNSGGLMPGLSTINEEPFAAKEVSRRKLEAIKDELKSMEQNKVWNLVELPKGCKRIGCKWVFKTKRDSHGNLEHYKARLVVKGFTKKDGIDYKKTFSPVSRKDSLRIILALVAHYDLEFHQIDVKTAFFNGDLEEDVYMNQPTNFFVEEKEQMENTVDRCIYLKVSGSKFIVLVLYVDDVLLASNDLGLLSETKKYLSNNFEMKDMDEMERIPYASIVGSLMYAQTCTRSDISFAELGYTTYKEMYWFDNTADDMEAGIHVIKGDAEINELRDAQKRNKGNNEFYLYFDHLIDVPKVVDDGVECDTIVLSESSSSSDDGYETTENEPYKSLSSGFEDTDSSDESLEKKKNSEEEEESFT* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3242 933 Gene3D - 33 344 IPR011989 -
Ahy17g3242 933 MobiDBLite consensus disorder prediction 883 933 - -
Ahy17g3242 933 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 615 736 IPR013103 -
Ahy17g3242 933 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 1 603 - -
Ahy17g3242 933 SUPERFAMILY DNA/RNA polymerases 615 808 IPR043502 -
Ahy17g3242 933 SMART arm_5 98 139 IPR000225 GO:0005515
Ahy17g3242 933 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 1 603 - -
Ahy17g3242 933 SUPERFAMILY ARM repeat 75 315 IPR016024 -
Ahy17g3242 933 Gene3D Tetratricopeptide repeat domain 348 522 IPR011990 GO:0005515
Ahy17g3242 933 MobiDBLite consensus disorder prediction 883 912 - -
Ahy17g3242 933 Coils Coil 595 615 - -
Ahy17g3242 933 MobiDBLite consensus disorder prediction 914 933 - -
Ahy17g3242 933 SUPERFAMILY TPR-like 380 485 IPR011990 GO:0005515
Ahy17g3242 933 Coils Coil 551 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3242 Ahy-Chr17 134495837 134509596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3242 604 803 Receptor kinase-like Gene Family AT4G23160 32.627 3.81e-38 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3242 - - ahf:112762577 1790.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3242 17 134495837 134509596 Ahy17g3242 17 134495837 134509596 ECH
Ahy17g3242 17 134495837 134509596 Ahy8g0958 8 18385202 18387861 hybridization