Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3231 ATGTCAAATCGATACGATCATGGCACGCAAGACATTAATACCAACAATAACAAACCTTCCGTCAGGAATCACAATAAATTCTTCCCCAAAACTCCCAATTCCAATCCAAACTCAGACCCAAACCCAAACCCTACCCTCTCATCCTCACTCAGAGGCAGAGGAGCCACACAACATATCCCAAACCCTACTGACCCTGCCGCTGGCAATTTCGTCCGCTACCTCCCTCAAGACGAGGCCGTCGCAGCTGGCCTTGGCGCCGACGATGGTGGATTGGACCCCGTAGAGTCCCAGAGAGTCGTTGATCTTCTCAATCGAGAGTTGTCTCGCTTACTCAAGTTGAAACCCAGGGAGTTCTGGAAGCAAGTGGCTAGTGATACTTCTTTGCATGAGTTTCTTGATAGCTTTCTGCAATTTAAGAGCAGATGGTATGATTTCCCTCATCGCGGGGCCAAAGGTATCGTCGCCGGAGTTATTGTTGGAGAGCTTGATTTGTGTCGACGGGTTTTCATGGTATTGTATCGAATTTCTTCTAATAAGGATCCTGGTGCTCGAGCTGCTGATGCCCTCACTTTGAGAGATCATCAAGTTCTTTTGCAGGAGAAGAAGTTGCTTGAATTGCCAAAGTTGTTTGATATATGTGCCATATATGGTCATGAAAATGAAGAAATAACAAGATTGCTGGTCAGAAATGCTTTGAATGCTCAGCCTTGGATCCATAATGATCTGACCACAGTAATATCCCATTTTCTAGGGATTGTTAGCACAATGCATGAGCGTTGCAGCTCCTCATTGGAGGTGTTATTTTCTTCTGGAAATCCTGATCACCATAATGCTACTTTTCTTCAAGCTGATCTTTTGGAGGTGATGGATTTTTTGAATGATGCTATTGTATCGATGGATGCTTTTGTTTGTTCATACAAACCAGCAGTTATATTCTTCTCTTGCCCTATTGAAACAAGCTATGGAAATGAGGAACTGCTGAGCTTCCTTGCCAGATTGCATGATTCACTGATTCCATCCTTGCAAAAGGGATTCCATATCATTTTTGCTGATAGACAAGATGAAACAGTAGCTAATATAGTAGTAAGTTTGAAGATGTTAAGAATGAGATTATTGAAGTTTGGGTGGCAATTGTTGAGCTCTTGTTATCTAAGTGAAGAAGTGTTTGGAGATAGCAATCCTCTCCCAGCTGCCACAAAGATGTTTCCTGCCAATGTGGAGGACCCACTCATTAGAGCAGATATTCTGGTTCAAACATTTAGAGAAATCAATTCGGTATCATTACAGCTTCAGGAAAGCCATCAGAAGCAAACATTTCTTCAAGATCTTGAGAGGAGTTTCAATATATTAAGCAGAATGGAGAGATTAAAGGATAATGGATGGATACTCATCGATGACGAACAGCTTCAATATTTATCTGGGATTTTTGGTTCTCCAAAAGATATACTTAAGGAGCCAGATTCTACAAGAACCCCAGTGCCAAATCAAACATTGCAGATGGATGAAGATGCTGCAATTGTGGAGTCAAAAATAAGTCAAATTAGGGACCTCTTTCCTGATTATGGTAAAGGGTTTTTGACTGCATGTCTTGAGGTGTATGACCAGAATCCAGAAGAGGTTATTCAAAGAATTTTAGAAGGAACCCTTCATGAAGATCTGAAACACTTGGACCCAACACTAGAGACGTTGCCAACAGGCAAGCCCACCACTGTGGGTGGGAAAGATAAAGGAAAAGGTAAACTAGTTGATTCTTCATCTACAGAAGTTGTCAGTGTCAAGCAACAGACAGGGGGGCAATTGATGTCATCCTCAGCTCCTGTAGGAAAATTTGTGAGGAAATCGAAGGATGATGAACCTGGTATTGGTATTCTGGATAAAAAGGATGACGAAAATACATCAAAAACTGCTGCTATGGTTTTGCAATATGAATATGACGATGAATATGATGACTCTTTTGATGACTTGGGTCTAAGTGTAGCGGACTCTGGAGTAGAGGAAAATGAGACACTGGCTGATCAAGTCAGTGCAAAATCGGGTAAATCATGGACAACAGAGATGGGAAACTCAGCCCAAAATGCGCCTCATTCAAAATGGGGCTCCAGGAAAAAACCACAGTACTATGTCAAGGATGGTAAGAATTATAGCTATAAAGTGGCAGGTGCAGTGGCGGTGGCAAATTCTGATGAAGCTTCACTAGTCAACCAAGCTCAGACAGAACTAATACATGGTCTTGGACGTGGTGGAAACTTTCCTCTTGGCGCAGTAAAGAAGCTGACAGAAGCCTATAAGGAGGATGATGATCAGTCTCGTGTTTCTGAAACAGAGGGAAGAGGGATGTTGGGCAAACCTGGAAGCAGAGAAAGGAAGGGAGGGGGAAAACGAAATGAGGTTCCGCCACAGCAGCAACAGCAACAGCAGGATAAACAATCTGATGTCCCGGAGGCTGAAGGGCAAGGACAAAGAGGGAGAGGTAGAGGCAGAGGGAGGGGAGGAGGAGGAGGAGGAAGAAGCAATCATTACAGGAAGGATCGAGCCATGAAGAAGCATTTCTCTGGAGTAGGTGGTTTTTAG 2571 0.4325 MSNRYDHGTQDINTNNNKPSVRNHNKFFPKTPNSNPNSDPNPNPTLSSSLRGRGATQHIPNPTDPAAGNFVRYLPQDEAVAAGLGADDGGLDPVESQRVVDLLNRELSRLLKLKPREFWKQVASDTSLHEFLDSFLQFKSRWYDFPHRGAKGIVAGVIVGELDLCRRVFMVLYRISSNKDPGARAADALTLRDHQVLLQEKKLLELPKLFDICAIYGHENEEITRLLVRNALNAQPWIHNDLTTVISHFLGIVSTMHERCSSSLEVLFSSGNPDHHNATFLQADLLEVMDFLNDAIVSMDAFVCSYKPAVIFFSCPIETSYGNEELLSFLARLHDSLIPSLQKGFHIIFADRQDETVANIVVSLKMLRMRLLKFGWQLLSSCYLSEEVFGDSNPLPAATKMFPANVEDPLIRADILVQTFREINSVSLQLQESHQKQTFLQDLERSFNILSRMERLKDNGWILIDDEQLQYLSGIFGSPKDILKEPDSTRTPVPNQTLQMDEDAAIVESKISQIRDLFPDYGKGFLTACLEVYDQNPEEVIQRILEGTLHEDLKHLDPTLETLPTGKPTTVGGKDKGKGKLVDSSSTEVVSVKQQTGGQLMSSSAPVGKFVRKSKDDEPGIGILDKKDDENTSKTAAMVLQYEYDDEYDDSFDDLGLSVADSGVEENETLADQVSAKSGKSWTTEMGNSAQNAPHSKWGSRKKPQYYVKDGKNYSYKVAGAVAVANSDEASLVNQAQTELIHGLGRGGNFPLGAVKKLTEAYKEDDDQSRVSETEGRGMLGKPGSRERKGGGKRNEVPPQQQQQQQDKQSDVPEAEGQGQRGRGRGRGRGGGGGGRSNHYRKDRAMKKHFSGVGGF* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3231 856 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 15 854 - -
Ahy17g3231 856 SMART cue_7 506 548 IPR003892 GO:0043130
Ahy17g3231 856 CDD CUE_ASCC2 508 547 IPR041800 -
Ahy17g3231 856 MobiDBLite consensus disorder prediction 1 69 - -
Ahy17g3231 856 Gene3D - 506 549 - -
Ahy17g3231 856 ProSiteProfiles CUE domain profile. 506 549 IPR003892 GO:0043130
Ahy17g3231 856 MobiDBLite consensus disorder prediction 780 794 - -
Ahy17g3231 856 MobiDBLite consensus disorder prediction 1 56 - -
Ahy17g3231 856 MobiDBLite consensus disorder prediction 668 698 - -
Ahy17g3231 856 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 15 854 - -
Ahy17g3231 856 MobiDBLite consensus disorder prediction 668 703 - -
Ahy17g3231 856 MobiDBLite consensus disorder prediction 796 813 - -
Ahy17g3231 856 Pfam CUE domain 508 548 IPR003892 GO:0043130
Ahy17g3231 856 SUPERFAMILY UBA-like 506 563 IPR009060 GO:0005515
Ahy17g3231 856 MobiDBLite consensus disorder prediction 761 856 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3231 Ahy-Chr17 134395484 134400519 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3231 K18667 - gmx:100778129 1184.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3231 17 134395484 134400519 Ahy17g3231 17 134395484 134400519 ECH
Ahy17g3231 17 134395484 134400519 Ahy8g0945 8 18204169 18209179 hybridization