Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3188 ATGATTCGAAGAGCTCTATGCTTCCCCAGTTTCATCAGGAAATCGCTGCTTATTCCACCCGTTATTTCTCCTTATTCTAATTCTTCCTCCAAGATCGGAGCTTACAATGGGTATGCATCTCAGACGTCTTCTCTTGAAGTTCCGGACTCGGCACCTTACAGGGAAAATGATGAGTATGCTGATGTGGACTGGGATAACCTTGGATTTGGACTAATGCCAACTGATTACATGTATGTAAACAAATGTGGTGCGGGGCAGCATTTTGGACATGGACAACTCAATCCTTATGGCAACATTCACCTTAGCCCATCAGCTGCTGTCTTAAATTATGGCCAGGGGTTATTCGAAGGCACGAAAGCATACAGAAAAGAGAACGGGCAGCTGCTTCTGTTCCGTCCAGAACAAAATGCCATTCGGATGAAGAGTGGCGCACAAAGAATGTGCATGGAAGCCCCTTCCGTTGACCAATTTGTCAACGCTTTGAAACAAACTGCTTTGGCTAATAAGCGCTGGGTTCCTCCTCCGGGGAAAGGATCGTTGTACCTTAGGCCTCTGCTTATAGGAAGCGGTGCGGTTTTGGGTTTGGCTCCAGCACCTGAATACACTTTCCTCATATATGCTTCCCCTGTCCGCAACTATTTCAAAGAGGGCTCTGCACCACTCAACTTGTACGTGGAGGAGAATTTTGATCGTGCTTCTCGCCGCGGCACCGGCAGCGTTAAAACCATTTCTAATTATGCCCCTGTATTGATGGCGCAACTTAGAGCCAAGAAGAATGGATTTTCGGATGTGTTGTATCTGGACTCAGCCACCAAGAAGAATCTAGAGGAGGTTTCTTCTTGTAACATTTTTATTGCCAAGGGAAGATGCATCTCAACACCTGGTACTAATGGAACCATTCTTGCTGGAATCACGAGAAAAAGCGTCATTGAACTTGCCCGTGATCACGGCTATGAGGTACAAGAGCGTGCTGTAGCTGTGGATGAATTAATGGAGGCTGATGAGGTTTTCTGCACGGGAACTGCTGTTGGTGTTGCTCCAGTCGGAGCCATCACATACCAAAATACAAGGATGGAATATAAAACGGGCTCTGGAACTATTTGTCAAGAGCTGTATAATACCCTTTTGGGAATTCAAACGGGTGCTATTGAAGATAAGAAGGGATGGATCATTGAAATTGGGTGA 1185 0.4599 MIRRALCFPSFIRKSLLIPPVISPYSNSSSKIGAYNGYASQTSSLEVPDSAPYRENDEYADVDWDNLGFGLMPTDYMYVNKCGAGQHFGHGQLNPYGNIHLSPSAAVLNYGQGLFEGTKAYRKENGQLLLFRPEQNAIRMKSGAQRMCMEAPSVDQFVNALKQTALANKRWVPPPGKGSLYLRPLLIGSGAVLGLAPAPEYTFLIYASPVRNYFKEGSAPLNLYVEENFDRASRRGTGSVKTISNYAPVLMAQLRAKKNGFSDVLYLDSATKKNLEEVSSCNIFIAKGRCISTPGTNGTILAGITRKSVIELARDHGYEVQERAVAVDELMEADEVFCTGTAVGVAPVGAITYQNTRMEYKTGSGTICQELYNTLLGIQTGAIEDKKGWIIEIG* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3188 394 PIRSF BCAT1 40 394 IPR005786 GO:0004084|GO:0009081
Ahy17g3188 394 PANTHER BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 27 393 - -
Ahy17g3188 394 ProSitePatterns Aminotransferases class-IV signature. 277 306 IPR018300 GO:0003824
Ahy17g3188 394 PANTHER AMINO ACID AMINOTRANSFERASE 27 393 IPR005786 GO:0004084|GO:0009081
Ahy17g3188 394 CDD BCAT_beta_family 100 381 IPR033939 GO:0004084|GO:0009081
Ahy17g3188 394 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 54 390 IPR036038 GO:0003824
Ahy17g3188 394 Gene3D - 37 221 IPR043131 -
Ahy17g3188 394 Pfam Amino-transferase class IV 113 351 IPR001544 GO:0003824
Ahy17g3188 394 Gene3D - 222 393 IPR043132 -
Ahy17g3188 394 TIGRFAM ilvE_II: branched-chain amino acid aminotransferase 90 393 IPR005786 GO:0004084|GO:0009081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3188 Ahy-Chr17 133829149 133834477 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3188 K00826 - gmx:100782644 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3188 17 133829149 133834477 Ahy8g0898 8 17382094 17387144 hybridization