Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3178 ATGAGTAACAGTTTGGGTACCCTGTGTGTAGGTTATCTGTTTGATATGGAAGGTGGAGAGAACATTCTAGATATCATTCATAATGATTATGATGATGGTGATGATGTTGAAATGGTTGATGTTGAAGAAGGAGAGTTGGTGGAACCTGATTCCCGGAATTCTTTGGGACAAAGTGAAGCTGGAGGTACCAATGAAGCAAATGAAGACTCTCATAACAAGGACCACAGGCTTAGAGCTAAAAAGAAAAGGAATAAGAGAAAGAAGAAAGCTTCAGGGTCCAACAAGGCAATTGATATAAACAGATTTGTGATAGATGTGTGTCGCCGTTTGAAAGAGAAAAAACAATATATGGTATACACTGCTGTAGGTTGCCTTGGGATTTCTGCACTAAGCGATCTCGTCAAAGAGGTTGATGCAATTCAGGCTTGTGGGGGCCAAAAAACAGCTGATGGCAGTCGATTCCGGACAGGGGGTGGCATACTGTGGAACATCATTAAAGTTCGAGAACCAAAGGTGTACAAAGAGATAATGAAAAAAGTAAAGGAATTCGAGAAGCAATTCAGGCAGCCATACGTTAAGCAACCACCTGTGCCAAAGAAGATAGATCCTTCGGAAGGGATCAACCTTCCGTTTGCTGACAGAGATGAGGGAAATGTTTTAGGCAGTGCCTTCCCTGCTTCCCAAATGCAAGATCAACATGAACCAGCAGCAACTTCTGAAGCGAAACCTATCCCTGTTATTCATGATAGGTTAAGGACCCCTGTTTCGTATGATGATGATCTGCTTGGAGAGGATCCAGAAAAAGATGCAACCTGA 816 0.4252 MSNSLGTLCVGYLFDMEGGENILDIIHNDYDDGDDVEMVDVEEGELVEPDSRNSLGQSEAGGTNEANEDSHNKDHRLRAKKKRNKRKKKASGSNKAIDINRFVIDVCRRLKEKKQYMVYTAVGCLGISALSDLVKEVDAIQACGGQKTADGSRFRTGGGILWNIIKVREPKVYKEIMKKVKEFEKQFRQPYVKQPPVPKKIDPSEGINLPFADRDEGNVLGSAFPASQMQDQHEPAATSEAKPIPVIHDRLRTPVSYDDDLLGEDPEKDAT* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3178 271 MobiDBLite consensus disorder prediction 220 271 - -
Ahy17g3178 271 MobiDBLite consensus disorder prediction 252 271 - -
Ahy17g3178 271 MobiDBLite consensus disorder prediction 51 65 - -
Ahy17g3178 271 PANTHER CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26 16 262 IPR039047 GO:0006408
Ahy17g3178 271 MobiDBLite consensus disorder prediction 45 93 - -
Ahy17g3178 271 Pfam Phosphorylated adapter RNA export protein, RNA-binding domain 103 181 IPR019385 -
Ahy17g3178 271 Gene3D - 94 190 IPR038092 -
Ahy17g3178 271 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3178 Ahy-Chr17 133579959 133583222 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3178 K14291 - gmx:100805103 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3178 17 133579959 133583222 Ahy17g3178 17 133579959 133583222 ECH
Ahy17g3178 17 133579959 133583222 Ahy8g0885 8 17130626 17133920 hybridization
Ahy16g3379 16 150697098 150701619 Ahy17g3178 17 133579959 133583222 PCT
Ahy6g2640 6 111651367 111655614 Ahy17g3178 17 133579959 133583222 PCT
Ahy17g3178 17 133579959 133583222 Ahy16g3379 16 150697098 150701619 PCT
Ahy17g3178 17 133579959 133583222 Ahy6g2640 6 111651367 111655614 PCT