Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3169 ATGACCATGAACGCCGCCTCTTATTCTTCCGTTGTTTCGCATTCTGCTTTCCGAAGTTTGGATACCAAGCTTTCTCCGTCATCTTCTGGTATCCCAAGTCTTATTCGTGTCACTTGTCATTCGGATTGTAACAAGTCTACATCACAAGCATCCTTACTTTTGTGTCGTAGCTCAAATAATGGATGGAAGGGCATGCTTGGTGGAGCTTCTTCTTGGGATACCCTTCCCAGGAGGAACCTAATTGGTCAAACTTCTTATTCTGTGAGTACAACCACATATGGAGGGGTTGCTATAGAATCTCCTTCTCATATTGCAGAAGAAAAAGTTGGGGTACTGCTGCTCAATCTAGGAGGACCAGAGACGCTGAATGATGTTCAGCCTTTTCTGTTCAATCTCTTTGCTGATCCTGATATCATCCGTCTTCCAAGGCTGTTTCAGTTTCTTCAGCGACCACTTGCAAAATTGATTTCTGTACTTCGGGCTCCTAAATCCAAGGAAGGATATGCTGCAATTGGTGGGGGCTCTCCTTTACGCAAAATCACAGATGATCAGGCACTTGCACTTAAAGAGGCTTTGGACGCAAAGGGCCTCTCCTCAAATGTCTACATTGGGATGCGGTACTGGTATCCATTCACTGAAGAAGCAGTTCATCAAATTAAGAGAGATGGAATAACAAGGCTTGTGGTGCTACCACTTTATCCCCAGTTCTCTATTTCCACTACTGGATCTAGCATCCGCGTTCTACAGCATATGTTCCGGGAAGATGCTTCTTTGTCCAAGCTTCCTGTTTCCATTATAAATTCTTGGTATCAACGACAAGGTTACATCAAGTCAATGGCTGATTTAATCGAGAAGGAGCTACAGAGCTTTTCTGAACCGAAGGAGGCAATGATATTTTTTAGCGCCCATGGTGTACCTGTCAGTTATGTTGAGGATGCTGGTGATCCATACCGCGATCAAATGGAGGAGTGCATCTACTTGATCATGCAGGAGTTGAAAGCTAGAGGAATTAACAATGAGCACACTCTTGCTTATCAGAGTCGAGTGGGCCCGGTACAGTGGTTGAAACCATATACAGATGAAACTCTCGTTGAGCTTGGTCAGAAAGGTGTGAGGAGTCTTTTAGCTGTTCCAGTGAGCTTTGTGAGTGAGCACATAGAGACCCTTGAAGAAATTGACATGGAGTACAGGGAGTTGGCTCTTGAATCTGGTATCAAGAATTGGGGGCGTGTTCCTGCTCTTGGTCTCACCCCTTCCTTCATTACAGACCTGGCAGATGCAGTGATAGAAGCTCTTCCATCTGCAAAAGCAATGTATGCATCTACCAGCACTTCTGAAGAAGAGCATGACCTACTTAGATACTTGGTCAAGATGTTCTTTGGTTCAATATTGGCATTCATCTTGTTTCTGTCACCTAGAATGATAACGGCATTCAGGAATCTAATCTAG 1449 0.4431 MTMNAASYSSVVSHSAFRSLDTKLSPSSSGIPSLIRVTCHSDCNKSTSQASLLLCRSSNNGWKGMLGGASSWDTLPRRNLIGQTSYSVSTTTYGGVAIESPSHIAEEKVGVLLLNLGGPETLNDVQPFLFNLFADPDIIRLPRLFQFLQRPLAKLISVLRAPKSKEGYAAIGGGSPLRKITDDQALALKEALDAKGLSSNVYIGMRYWYPFTEEAVHQIKRDGITRLVVLPLYPQFSISTTGSSIRVLQHMFREDASLSKLPVSIINSWYQRQGYIKSMADLIEKELQSFSEPKEAMIFFSAHGVPVSYVEDAGDPYRDQMEECIYLIMQELKARGINNEHTLAYQSRVGPVQWLKPYTDETLVELGQKGVRSLLAVPVSFVSEHIETLEEIDMEYRELALESGIKNWGRVPALGLTPSFITDLADAVIEALPSAKAMYASTSTSEEEHDLLRYLVKMFFGSILAFILFLSPRMITAFRNLI* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3169 482 PANTHER FERROCHELATASE 38 481 IPR001015 GO:0004325|GO:0006783
Ahy17g3169 482 ProSitePatterns Ferrochelatase signature. 298 317 IPR019772 GO:0004325|GO:0006783
Ahy17g3169 482 Gene3D - 270 413 - -
Ahy17g3169 482 CDD Ferrochelatase_C 279 415 IPR033644 -
Ahy17g3169 482 Gene3D - 108 432 - -
Ahy17g3169 482 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 38 481 - -
Ahy17g3169 482 TIGRFAM hemH: ferrochelatase 106 431 IPR001015 GO:0004325|GO:0006783
Ahy17g3169 482 Pfam Ferrochelatase 108 431 IPR001015 GO:0004325|GO:0006783
Ahy17g3169 482 Hamap Coproporphyrin III ferrochelatase [cpfC]. 107 432 IPR001015 GO:0004325|GO:0006783
Ahy17g3169 482 CDD Ferrochelatase_N 109 271 IPR033659 -
Ahy17g3169 482 SUPERFAMILY Chelatase 107 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3169 Ahy-Chr17 133518490 133522040 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3169 K01772 - gmx:100813423 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3169 17 133518490 133522040 Ahy17g3169 17 133518490 133522040 ECH