Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3162 ATGACGGAACCAGCTTCCAAACCCAACGGAAACGGCGCAATTAACGGAACCGCCGCAGCCCCCGCGGTTAACGGCAACCAAGGCCCAGTCAAATCCCAGCTCTACAACCCCAACCGCCAAGTCTATCGCCCACAGTCGCACTACCACCGCCGGCACCGCTCCGGTCGCAGCATCTGCTGCTGCTGCTGCTTCTGGACAATCCTCATCATCCTCGCCGCCGCACTCCTCGCCGCAATCGTAGGCGCCGCACTCTACGTTCTTTACCGGCCACACCAGCCGCAATTCTCCATCACCAACCTCCGCATTGCGAGGATGAACCTAACAACCTCCACTGACTCGCCGTCACACCTGACCACACTCTTCAACCTCACTCTCATCGCAAAGAACCCTAACAACCACCTTGTGTTCTTCTACGATCCGTTCACCGTGACGGCGCTGTCAGATTCCGTTTTCATTGGGAACGGGTCGCTAACAGCGTTTGAGTCCGACAAGAACAACCAGACGAGCTTGAGGGCGGTGGTGTCGGGGTCGCAGGATCTGGACACGGAGTCGCTGAGCACGATGAGATCGGCGCTGAAGAAGAAGAAAGGGTTCCCGGTGGTGATTCAGATGGACACCAAGGTGAAGATGAGAATGGAGTGGCTCAAGAGCAAGAAGGTTGGCATCAGAGTCACCTGCGATGGGATCAGGGGCACCGTCCCCGCCGGCAAGTCGCCGGCTGTTGCTTCCGTCATCGACTCCCAGTGTAAGGTTGATCTCAGAATCAAGATCTGGAAGTTCTCTTTTTAG 789 0.5703 MTEPASKPNGNGAINGTAAAPAVNGNQGPVKSQLYNPNRQVYRPQSHYHRRHRSGRSICCCCCFWTILIILAAALLAAIVGAALYVLYRPHQPQFSITNLRIARMNLTTSTDSPSHLTTLFNLTLIAKNPNNHLVFFYDPFTVTALSDSVFIGNGSLTAFESDKNNQTSLRAVVSGSQDLDTESLSTMRSALKKKKGFPVVIQMDTKVKMRMEWLKSKKVGIRVTCDGIRGTVPAGKSPAVASVIDSQCKVDLRIKIWKFSF* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3162 262 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 4 261 - -
Ahy17g3162 262 MobiDBLite consensus disorder prediction 1 30 - -
Ahy17g3162 262 PANTHER HARPIN-INDUCED PROTEIN 4 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3162 Ahy-Chr17 133425664 133427072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3162 37 255 EF-hand Containing Proteins AT5G21130 26.754 8.12e-18 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3162 - - gmx:100786652 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3162 17 133425664 133427072 Ahy17g3162 17 133425664 133427072 ECH
Ahy17g3162 17 133425664 133427072 Ahy8g0874 8 16995278 16996639 hybridization