Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3161 ATGGCTGGTGAGGTAAAATCCACCAGAAAGTGCAGCATTTCACTTGAAGAACTCAGCAAACACAACAAGATAGAGGATCTTTGGATCTCAATCCATGGAAAGATCTACAATGTAACCAACTGGGCCAAACACCACCCTGGAGGTGACCTTCCATTGCTTAACCTCGCCGGCCAAGACGCCACAGACGCGTTCCTCGCCTACCATCCCCTTGCAGCCTCCCAACACCTTCACAACTTCTTCACAGGGTACTATCTCCAAGATTACGCCATCTCCCAGGTCTCTGGAGACTATAGGAAGCTCTTGTCCCACTTCACAGCAATGGGGATGTTTGATACCAAGGGACACACCGTCTTCTTCACAATGCTGCTCATGGCAGTGCTATTCTGTTCCAGTGTTTATGGCGTGTTCTGTTCTAGCAGCCCTTTGGTGCATGTCTGTTGTGGTGGCCTAATGGGATTCTTTTGGATTCAGAGTGGTTGGATTGGACATGATTCCGGCCACTACCAGGTCATGACGACGCAGCGTTTCAACCGTTTCGCGCAAATTCTCTCCGGGAATTGCCTTGCTGGGATTAGTATTGGGTGGTGGAAGTGGAACCACAATGCTCACCACATTGCTTGCAATAGCCTTGATCATGATCCGGATCTTCAGCACATTCCTTTCTTTGTGGTATCTTCCAAGTTCTTCAATTCCATTACTTCTTGCTTCTATGATAGGAAATTGAACTTTGATTGTGTTGCTAGGTTCTTGGTGAGCTATCAGCACTTCACATTTTACCCTGTAATGTGCTTTGCTAGGCTCAATTTGTTTGCACAATCTTTCTTCTTCTTGTTTTCCAATAGGAAGGTACCAAACAGGGTTCAAGAGATTTTAGGGATGCTTGTTTTCTGGATTTGGTACCCTCTTTTGGTTTCATTCTTACCAAATTGGGGAGAAAGAATAGTGTTTGTGATTGCAAGTTTTGCTGTGACTGGGATACAGCATGTTCAGTTCTGTTTGAACCATTTTTCTTCAAGTGTGTATGTTGGGCCACCAAGAAGCAGTGATTGGTTTGAGAAGCAGACAATTGGGACACTCAATGTGGATTGCTCTCCTTGGATGGACTGGTTCCATGGTGGACTGCAGTTCCAGGTGGAGCACCACCTGTTTCCGCGGCTGCCGCGGTGCCATCTGAGGAGCATTTCACCTCTTGTGAAGGAGCTTTGCAAGAAGCATGGATTGCCTTACAACCATGTCTCATTTTGGAAAGCTAATGTGCTAACACTTAACACACTCAAGGATGCAGCATTGCAGGCTAGAAACCTTTCCAATCCCATTCCCAAGAACTTGGTTTGGGAAGCCGTTAACACTCATGGATGA 1359 0.4628 MAGEVKSTRKCSISLEELSKHNKIEDLWISIHGKIYNVTNWAKHHPGGDLPLLNLAGQDATDAFLAYHPLAASQHLHNFFTGYYLQDYAISQVSGDYRKLLSHFTAMGMFDTKGHTVFFTMLLMAVLFCSSVYGVFCSSSPLVHVCCGGLMGFFWIQSGWIGHDSGHYQVMTTQRFNRFAQILSGNCLAGISIGWWKWNHNAHHIACNSLDHDPDLQHIPFFVVSSKFFNSITSCFYDRKLNFDCVARFLVSYQHFTFYPVMCFARLNLFAQSFFFLFSNRKVPNRVQEILGMLVFWIWYPLLVSFLPNWGERIVFVIASFAVTGIQHVQFCLNHFSSSVYVGPPRSSDWFEKQTIGTLNVDCSPWMDWFHGGLQFQVEHHLFPRLPRCHLRSISPLVKELCKKHGLPYNHVSFWKANVLTLNTLKDAALQARNLSNPIPKNLVWEAVNTHG* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3161 452 PIRSF FA_sphingolip_des 1 439 IPR012171 GO:0016491
Ahy17g3161 452 PANTHER DELTA(8)-FATTY-ACID DESATURASE 2 9 451 - -
Ahy17g3161 452 Pfam Fatty acid desaturase 143 412 IPR005804 GO:0006629
Ahy17g3161 452 PANTHER FATTY ACID DESATURASE 2 9 451 IPR012171 GO:0016491
Ahy17g3161 452 Gene3D - 3 85 IPR036400 -
Ahy17g3161 452 CDD Delta6-FADS-like 147 407 - -
Ahy17g3161 452 Pfam Cytochrome b5-like Heme/Steroid binding domain 14 84 IPR001199 -
Ahy17g3161 452 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 10 94 IPR001199 -
Ahy17g3161 452 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 13 87 IPR036400 -
Ahy17g3161 452 SMART Cyt_b5_2 13 85 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3161 Ahy-Chr17 133415533 133418749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3161 7 452 Lipid Metabolism Gene Families AT2G46210 62.780 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3161 K21737 - cpap:110822096 737.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3161 17 133415533 133418749 Ahy17g3161 17 133415533 133418749 ECH