Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3151 ATGGATTCTTCACAATCACAACAAGGGTCTAAGCTGGCTGGTTTGGTGGAGAATGCATCGATTCAGAGGGATGGATCTCGATTGGGTCATGGCGTCCCTATCTATGTTAAGGAGCTCATCGCCGGTGGCTTCGCCGGTGCGATTTCTAAGACCACCGTTGCACCCCTCGAACGGGTCAAGATTCTCTGGCAGACAAGGACAGCAGGATTTCATACTCTGGGTGTGTATCAATCATTGAAAAGGTTATCAAAGCATGAAGGATTTCTAGGACTATATAAAGGAAATGGAGCTAGCGTTATCCGGATTGTTCCATATGCAGCCTTGCATTTTATGACATATGAGCGATATAAAAGCTGGATCTTGAGCAATTATCCTATGTTAGGATCAGGTCCTATTGTTGATCTCTTAGCTGGTTCCGCAGCAGGAGGAACTTCAGTAATATGTACATATCCCTTAGATCTTGCCCGCACCAAACTCGCTTATCGGGTGGTAGAGAAAAAAGGCAGTTTCAAAGATGGTGTGAAAGGAGGTCATTCTCAAACTGGTCACAACAGCATTAAAAGTGTTCTTACAAGTGTCTACAGGGAAGGGGGAGTTCGTGGACTTTATAGAGGTGCAGGACCAACTATTACTGGAATACTTCCATATGCTGGTTTAAAGTTCTACACGTATGAGACATTGAAATTGCATGTTCCTGAAGAACATCAAAAGTCCATTTTGATGCGCCTCTCTTGCGGAGCCTTAGCTGGGTTATTTGGCCAGACCTTAACATACCCTTTAGATGTTGTTAAGAGACAAATGCAGGTTGGTAACTTGGAAAATGCAGCTCATGAAAATGCCAGATACCGAAATACATTCCATGGACTAAGAACAATTGTTCAAAACCAAGGGTGGAGACAGTTGTTTGCAGGTGTAAGCATCAACTATATAAGGATTGTTCCTTCAGCTGCAATAAGTTTCACCACATACGACATGATGAAGTCTTGGCTCGGCATACCACCCCAACAGAGGTCTCGATCAGTTTCCACTGGATGA 1035 0.4386 MDSSQSQQGSKLAGLVENASIQRDGSRLGHGVPIYVKELIAGGFAGAISKTTVAPLERVKILWQTRTAGFHTLGVYQSLKRLSKHEGFLGLYKGNGASVIRIVPYAALHFMTYERYKSWILSNYPMLGSGPIVDLLAGSAAGGTSVICTYPLDLARTKLAYRVVEKKGSFKDGVKGGHSQTGHNSIKSVLTSVYREGGVRGLYRGAGPTITGILPYAGLKFYTYETLKLHVPEEHQKSILMRLSCGALAGLFGQTLTYPLDVVKRQMQVGNLENAAHENARYRNTFHGLRTIVQNQGWRQLFAGVSINYIRIVPSAAISFTTYDMMKSWLGIPPQQRSRSVSTG* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3151 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 230 IPR018108 -
Ahy17g3151 344 PANTHER GRAVES DISEASE MITOCHONDRIAL SOLUTE CARRIER PROTEIN-LIKE 23 338 - -
Ahy17g3151 344 SUPERFAMILY Mitochondrial carrier 36 325 IPR023395 -
Ahy17g3151 344 PRINTS Mitochondrial carrier protein signature 94 114 IPR002067 GO:0055085
Ahy17g3151 344 PRINTS Mitochondrial carrier protein signature 51 65 IPR002067 GO:0055085
Ahy17g3151 344 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Ahy17g3151 344 PRINTS Mitochondrial carrier protein signature 38 51 IPR002067 GO:0055085
Ahy17g3151 344 PRINTS Mitochondrial carrier protein signature 203 221 IPR002067 GO:0055085
Ahy17g3151 344 PRINTS Mitochondrial carrier protein signature 246 268 IPR002067 GO:0055085
Ahy17g3151 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 237 329 IPR018108 -
Ahy17g3151 344 Pfam Mitochondrial carrier protein 131 231 IPR018108 -
Ahy17g3151 344 Pfam Mitochondrial carrier protein 35 122 IPR018108 -
Ahy17g3151 344 Pfam Mitochondrial carrier protein 237 330 IPR018108 -
Ahy17g3151 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 33 119 IPR018108 -
Ahy17g3151 344 Gene3D Mitochondrial carrier domain 34 331 IPR023395 -
Ahy17g3151 344 PANTHER SOLUTE CARRIER FAMILY 25 23 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3151 Ahy-Chr17 133270008 133273201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3151 111 339 Organic Solute Cotransporters AT1G14560 67.100 5.10e-112 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3151 - - gmx:100784421 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3151 17 133270008 133273201 Ahy17g3151 17 133270008 133273201 ECH
Ahy17g3151 17 133270008 133273201 Ahy8g0862 8 16835965 16838887 hybridization