Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3135 ATGGGTCGTGTTCCGACGAAGCAGCAGAAGAATAACAGATCGAAGGATGGCGGCGATGGAACTCAAGAAAAGCAGAAACCGAGTCTGAAGGGGGCAGAGAGGTCGGCGTACTTCGCTCGGAGAGAGGCGGCGAAGGTTCTCAGAGTGGTTCTGCAGGGCGACGCCAACCGCCGTGCACTGGCCTCCATCAAATCCCTCATCTACAAACCCTCCGTCAGGAACAAGAAGGCCACTTTCGCCCTCATTTGTCAGACTCTCAAACATCTTCCCATTATTAAAGATGTATTGGAAGCTTCTTCTATACTCAACACCAAGTGGAAGAGACAACAAGAATTGGTTTACATCATTGTGTATGATATTCTTTTCGGCCAGGCAGTTGCAGTGGCTGGTGATGCAGAGAAGTATCTCATGCGACATAAGAACGCACTACAATCCACTTTGAAACAGCTTTTGTTACGGAGAAATGTGAAGAACGTTGAACAGTTGATTGCTCTGAATCAGCTTCCTGATGTTTCCCTGCCTCGTTATGTTCGCGTCAATACGCTCAAGCTGGATGTCGATTCTGCCTTACTTGAGCTTAAGGAAAAGTACTCGGTTGAAAAAGATGATTTACTGCCTGACTTGCTGATACTCCCACCGGGCACTGATTTGCATGATCATCCCCTTGTCAACAATGGAAGTATCTTTATGCAAGGTAAGGCGAGTTCCATGGTAGCACCGGCCCTCAACCCTGAACCAGGATGGGAGGTTATTGATGCATGTGCTGCTCCAGGAAACAAAACTGTCCACCTAGCCGCCCTTATGAAGAGGAAGGGTAGGATTATAGCATGTGAACTGAATAAACAAAGGATTAAGCGTTTGAAAGAGACTATCAAACTATCCGGGGCTTCTAACATACATGTTCTCAATGAGGATTTCTTGAACATAGATCCCAAGGCACCTTCATATTCTAAGGTGAAGGCTATTCTTTTGGATCCTTCCTGTTCTGGTTCTGGTACTGCTGCTTCAAGATTAGACCATCTGCTCCCATCTAAAGCAGCAGGTCAGGATACCGATATGGAAAGATTGAACAAGCTTGCAGCTTTCCAGAGAAAGGCTCTGCAGCATGCTTTAAGCTTTCCAGCAGTTGAAAAAATTGTGTATAGCACATGTTCAATCAACCAAATTGAGAATGAAGATGTCATCAAATCTGTTCTTCCCATTGCCGAATCACATGGATTTGAACTTGTGAATCCCTTCGCTGAATGGCACTGTCGTGGCCTACCTGTGTTTAAAGGCTCTGAAAACTTGGTTCGGACAGATCCTGCCGCAGACGGCGAGGGCTTCTTCATTGCTCTGTTTGCCAAGAAGAAAAATGTGCAAAAGAAGAAGAAACACTTCTTTCCCCGCATTCATACTGATCCTTTCAGAACCTGGTTGTATTACCGGCTCAACGGCCCTTGA 1443 0.4602 MGRVPTKQQKNNRSKDGGDGTQEKQKPSLKGAERSAYFARREAAKVLRVVLQGDANRRALASIKSLIYKPSVRNKKATFALICQTLKHLPIIKDVLEASSILNTKWKRQQELVYIIVYDILFGQAVAVAGDAEKYLMRHKNALQSTLKQLLLRRNVKNVEQLIALNQLPDVSLPRYVRVNTLKLDVDSALLELKEKYSVEKDDLLPDLLILPPGTDLHDHPLVNNGSIFMQGKASSMVAPALNPEPGWEVIDACAAPGNKTVHLAALMKRKGRIIACELNKQRIKRLKETIKLSGASNIHVLNEDFLNIDPKAPSYSKVKAILLDPSCSGSGTAASRLDHLLPSKAAGQDTDMERLNKLAAFQRKALQHALSFPAVEKIVYSTCSINQIENEDVIKSVLPIAESHGFELVNPFAEWHCRGLPVFKGSENLVRTDPAADGEGFFIALFAKKKNVQKKKKHFFPRIHTDPFRTWLYYRLNGP* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3135 480 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 25 454 IPR023267 GO:0001510
Ahy17g3135 480 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 173 450 IPR029063 -
Ahy17g3135 480 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 165 450 IPR001678 GO:0008168
Ahy17g3135 480 Gene3D Sun protein; domain 3 166 230 - -
Ahy17g3135 480 Gene3D Vaccinia Virus protein VP39 231 457 IPR029063 -
Ahy17g3135 480 PRINTS RNA (C5-cytosine) methyltransferase signature 251 261 IPR023267 GO:0001510
Ahy17g3135 480 PRINTS RNA (C5-cytosine) methyltransferase signature 320 332 IPR023267 GO:0001510
Ahy17g3135 480 PRINTS RNA (C5-cytosine) methyltransferase signature 376 392 IPR023267 GO:0001510
Ahy17g3135 480 PRINTS RNA (C5-cytosine) methyltransferase signature 432 449 IPR023267 GO:0001510
Ahy17g3135 480 MobiDBLite consensus disorder prediction 9 34 - -
Ahy17g3135 480 PANTHER BNAA09G04380D PROTEIN 25 454 - -
Ahy17g3135 480 CDD AdoMet_MTases 250 338 - -
Ahy17g3135 480 MobiDBLite consensus disorder prediction 1 34 - -
Ahy17g3135 480 Pfam 16S rRNA methyltransferase RsmB/F 241 447 IPR001678 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3135 Ahy-Chr17 133070591 133074179 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3135 K15264 - gmx:100775620 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3135 17 133070591 133074179 Ahy17g3135 17 133070591 133074179 ECH
Ahy17g3135 17 133070591 133074179 Ahy8g0847 8 16672174 16675920 hybridization