Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3134 ATGGATTTCAGGTTGATGGGACTCGATTCTCCATTGCTGAGCACCATTCACCACATGATGGATATGAGCGACGACAATGCCGACGCCAAGAACATCAACGCTCCCACAAGGACCTACGTGCGTGACGCGAAGGCGATGGCGGCTACTCCGGCCGACGTGAAGGAGTATCCTCAGTCGTACGTGTTCGTGATCGACATGCCGGGACTGAAGTCCGGTGACATTAAGGTTCAGGTGGAGGACGACAACGTTCTGATCATCAGCGGCGAGAGGAAGAGGGACGAAGAGAAAGAAGGTGCTAAGTATTTGAGGATGGAGAGGAGGGTTGGAAAATTCATGCGCAAGTTTGTGTTACCGGAGAATGCAAACACTGATGCTATTTCTGCTGTGTGTCAAGACGGAGTTCTCACCGTCACCGTTCAGAAGCTTCCTCCTCCTGAGCCTAAGAAGCCTAAGACTATTGAGGTTAAGATTGCTTGA 477 0.5115 MDFRLMGLDSPLLSTIHHMMDMSDDNADAKNINAPTRTYVRDAKAMAATPADVKEYPQSYVFVIDMPGLKSGDIKVQVEDDNVLIISGERKRDEEKEGAKYLRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKIA* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3134 158 SUPERFAMILY HSP20-like chaperones 28 150 IPR008978 -
Ahy17g3134 158 Pfam Hsp20/alpha crystallin family 52 156 IPR002068 -
Ahy17g3134 158 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 8 157 - -
Ahy17g3134 158 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 42 158 IPR002068 -
Ahy17g3134 158 PANTHER 18.0 KDA CLASS II HEAT SHOCK PROTEIN 8 157 - -
Ahy17g3134 158 Gene3D - 9 157 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3134 Ahy-Chr17 133069236 133069991 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3134 K13993 - pop:7462237 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3134 17 133069236 133069991 Ahy17g3134 17 133069236 133069991 ECH
Ahy17g3134 17 133069236 133069991 Ahy8g0846 8 16670803 16671613 hybridization