Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3131 ATGGACCGCTTGCGTCCCCGCAACAGACCCCTCTTTTCTGGGTTTACAAATTCCGAGATTGAGAAATTGGAGAGATTGGTAAGGGAGGCAAGAGAAAAATCGTTGGATAAGGAGTTTTGCCATAAGCTTGCTATAGCCTTCAACCGCTCTGCTGGCCGTGCCGGGAAACCTGCGGTTAGATGGACTGAGATACAAAGTTGGTTTGAGGATAGGCTCCAAGACTTACCAGATGACCCTAATAATGAATTGATGATTCCCAAAGACCCTGAATGTAATAAGGAAGGAGAAATTGTTAGAGACTTATCAGAATTGGAATTCGAAGCAAAGTCATCCAAAGATGGAGCATGGTACGATGTTGAGACATTTCTAGCTCACAGATTTAACAGTAATGGGGAAGCTGAAGTCCTTGTCAGATTTATTGGGTTCGGGGGTGATGAAGATGAATGGATCACTATGAAAAATTCAGTTAGGAAACGTTCTGTTCCCTTGGAAAACACAGAATGTTGCAACCTGAATGTTGGAGACCATGTGCTGTGCTTCCAGGAGAGGAAAGACCAAGCAATTTACTATGATGCTCACATTCTAGAGATCCAAAGGAGAATACATGATATAAGAGGATGCAGGTGTCAGATTTTGGTTCGGTATGATCATGACAACAGTGAGGAATCTGTTCGGTTAAGAAGACTTTGCAGAAGACCAAGATCTTAG 708 0.4294 MDRLRPRNRPLFSGFTNSEIEKLERLVREAREKSLDKEFCHKLAIAFNRSAGRAGKPAVRWTEIQSWFEDRLQDLPDDPNNELMIPKDPECNKEGEIVRDLSELEFEAKSSKDGAWYDVETFLAHRFNSNGEAEVLVRFIGFGGDEDEWITMKNSVRKRSVPLENTECCNLNVGDHVLCFQERKDQAIYYDAHILEIQRRIHDIRGCRCQILVRYDHDNSEESVRLRRLCRRPRS* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3131 235 Gene3D - 101 162 - -
Ahy17g3131 235 Coils Coil 13 33 - -
Ahy17g3131 235 PANTHER OS09G0346900 PROTEIN 9 234 - -
Ahy17g3131 235 Gene3D - 163 235 - -
Ahy17g3131 235 SUPERFAMILY Chromo domain-like 113 155 IPR016197 -
Ahy17g3131 235 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 9 234 IPR039276 -
Ahy17g3131 235 Pfam SAWADEE domain 103 230 IPR032001 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3131 Ahy-Chr17 133042662 133045955 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3131 - - lang:109344225 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3131 17 133042662 133045955 Ahy8g0842 8 16617383 16620504 hybridization