Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3128 ATGATCTGCCTCAATAGATACAGTCTTCTGGAACCAACTACCACGAGGGTGGTGTTGGGAGTGAGAAAGTTGTTAGCAGTGATGTCAAGCACATTGATGAACGGTGGTGTTGAAGCTGCTGCTGGTAGTGGTGGTGGTGGTGTTAGAGACTTGTATGGTGAAGACAGAGCCACGGAGGATCAGCTTATCACCCCTTGGTCCTTCTCTGTCTCAAGTGGCTGCACTTTGCTGCGCGATCCGCGCTACAACAAAGGCCTCGCCTTCACCGAGAGAGAAAGAGATGCTCATTACCTGCGAGGCCTTTTGCCACCAGCAGTATTCAATCAAGAACTTCAGGAGAAGAGGTTGATGCATAACCTTCGCCAGTATGAAGTTCCTCTGCATAGGTACATGGCCATGATGGATCTTCAGGAGAGGAATGAGAGGCTGTTTTACAAGATTCTGATTGATAACGTTGAGGAACTGCTTCCTGTTGTTTACACTCCAACAGTGGGAGAAGCCTGCCAGAAATATGGAAGCATTTTCCGTCGTCCGCAGGGTCTATACATCAGCTTGAAAGAGAAAGGTAAGATCCTTGAAGTACTGAAAAACTGGCCAGAGAAGAACATTCAAGTTATTGTTGTCACTGATGGCGAGCGTATATTAGGACTCGGAGATCTTGGCTGCCAGGGAATGGGGATTCCTGTTGGGAAGCTTTCGCTCTATACTGCATTGGGAGGGGTTCGCCCTTCATCATGCTTGCCTATAACCATTGATGTTGGCACAAACAATGAGAAGTTGCTGAATGATGAGTTTTACATTGGTCTCAGACAAAAGCGTGCAACTGGGAAGGAATATGCTGAGCTTCTAGATGAGTTCATGCGCGCTGTTAAGCAGAACTATGGGGAGAAAGTTCTTATTCAGTTTGAAGACTTCGCGAATCATAATGCGTTCGATCTGCTTGCAAAATACAGTTCATCTCATCTTGTTTTCAATGATGATATTCAGGGTACAGCATCTGTGGTATTAGCAGGATTGCTTGCTTCTTTAAAATTAGTTAGGGGAACCTTAGCTGATCATACCTTCTTATTTTTGGGTGCTGGAGAGGCTGGAACTGGTATTGCAGAGTTGATAGCACTTGAAATATCAAAACAGACAAAAGCTCCAGTGGAAGAAACCCGCAAGAAGATTTGGCTTGTCGACTCCAAGGGTCTTATTGTTAGCTCTCGCCTCGGATCGCTTCAGCACTTCAAAAAGCCTTGGGCACATGAGCATGAACCTGTAAAGGAGCTTGTTGGTGCTATCAAGGCAATCAAGCCAACAGTATTGATTGGATCATCTGGAGTAGGGAAGACATTTACCAAAGAAGTGATTGAAGCCATGGCATCATTGAATAAGAAACCGCTCATTCTTGCTCTCTCCAATCCAACATCTCAATCTGAGTGCACTGCTGAAGAAGCTTATACATGGAGCAAGGGTCAAGCAATCTTTGCTAGTGGTAGCCCATTTGATCATGTTGAATATGAAGGAAAAGTCTTTGTTCCTGGACAGGCCAACAATGCTTACATATTCCCTGGTTTCGGCTTGGGTTTGATCATCTCCGGTGCAATCCGCGTACGCGATGAGATGCTCTTGGCAGCCTCTGAAGCTTTGGCTGCACAAGTGTCACAGGAGAACTATGATAAAGGACTGATTTACCCTCCATTCTCAAATATCAGAAAGATATCAGCACATATTGCTGCTAATGTGGCAGCCAAGGCATATGAACTTGGTCTTGCTTCTCATCTACCTCGACCTAAGGATCTTGTCAAATATGCAGAAAGTTGCATGTACAGCCCAGGCTACAGAAACTACCGTTGA 1839 0.4535 MICLNRYSLLEPTTTRVVLGVRKLLAVMSSTLMNGGVEAAAGSGGGGVRDLYGEDRATEDQLITPWSFSVSSGCTLLRDPRYNKGLAFTERERDAHYLRGLLPPAVFNQELQEKRLMHNLRQYEVPLHRYMAMMDLQERNERLFYKILIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNEKLLNDEFYIGLRQKRATGKEYAELLDEFMRAVKQNYGEKVLIQFEDFANHNAFDLLAKYSSSHLVFNDDIQGTASVVLAGLLASLKLVRGTLADHTFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIWLVDSKGLIVSSRLGSLQHFKKPWAHEHEPVKELVGAIKAIKPTVLIGSSGVGKTFTKEVIEAMASLNKKPLILALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDHVEYEGKVFVPGQANNAYIFPGFGLGLIISGAIRVRDEMLLAASEALAAQVSQENYDKGLIYPPFSNIRKISAHIAANVAAKAYELGLASHLPRPKDLVKYAESCMYSPGYRNYR* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3128 612 Gene3D - 326 612 - -
Ahy17g3128 612 PRINTS Malic enzyme signature 203 232 IPR001891 GO:0004470|GO:0004471
Ahy17g3128 612 PRINTS Malic enzyme signature 458 474 IPR001891 GO:0004470|GO:0004471
Ahy17g3128 612 PRINTS Malic enzyme signature 355 371 IPR001891 GO:0004470|GO:0004471
Ahy17g3128 612 PRINTS Malic enzyme signature 239 261 IPR001891 GO:0004470|GO:0004471
Ahy17g3128 612 PRINTS Malic enzyme signature 143 167 IPR001891 GO:0004470|GO:0004471
Ahy17g3128 612 PRINTS Malic enzyme signature 299 317 IPR001891 GO:0004470|GO:0004471
Ahy17g3128 612 PRINTS Malic enzyme signature 324 340 IPR001891 GO:0004470|GO:0004471
Ahy17g3128 612 Gene3D - 71 325 IPR037062 GO:0004471
Ahy17g3128 612 SMART Malic_M_2 328 581 IPR012302 GO:0051287
Ahy17g3128 612 PANTHER MALIC ENZYME 35 612 - -
Ahy17g3128 612 PANTHER MALIC ENZYME-RELATED 35 612 - -
Ahy17g3128 612 Pfam Malic enzyme, NAD binding domain 328 580 IPR012302 GO:0051287
Ahy17g3128 612 ProSitePatterns Malic enzymes signature. 324 340 IPR015884 GO:0004471
Ahy17g3128 612 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 53 327 IPR046346 -
Ahy17g3128 612 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 328 611 IPR036291 -
Ahy17g3128 612 PIRSF ME 47 612 IPR001891 GO:0004470|GO:0004471
Ahy17g3128 612 Pfam Malic enzyme, N-terminal domain 137 317 IPR012301 GO:0004471
Ahy17g3128 612 CDD NAD_bind_1_malic_enz 328 606 - -
Ahy17g3128 612 SMART malic_2 137 318 IPR012301 GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3128 Ahy-Chr17 133000142 133004999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3128 K00029 - gmx:100801564 1074.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3128 17 133000142 133004999 Ahy8g0839 8 16575504 16580130 hybridization