Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3082 ATGGCTCAATTCCGGCGAACTCTGTCGCCGGCGTATCATGATCGGCAGTACCCGAACGGCGCCGGCGGTGTCTTATCTGTTTCATCTCCGTCTCACAAGTTCTCTTCCACAAACGCCAAGTATACATCTCCGTTTCCGGCGCTGGCGACGAGTGCGGCGGCGCTTCGGAAGTTTCTCGCCGGAGTCTTTGTCCGGAGGTACGGCCGGAAAGGACAGTGGAGGAAGGCTCTGTACCGTTGCCTGCTATGCTTCTTCGTCGGTTTCATGCTCGGAATGTTTCCATTCGGCCACCACGTCGTCGTCGACGACGTTCGCCCTAGCGACATGTCGTTCGAGATCAAGCCACCTCACGCCAACGCGCAGTTGCTTCAGGAGAATCACGTTCTCAAGAACCGCGTCGGCGGAAAAGAAGGAACCGAAGTAGTTGAAGCCGCGGTCGGTGGCGGCAGCGATAGCGGCAGAGAGAGCGGTTTCATCATCGATCCGGTGAGCCTGAGCGTAGCGAACCATCACTCGATAGCGGAGCGCTTCGATTTCGTGCCGCGGAAGCAGCTGATTGTGGTAACACCGACCTATAACCGTGCTTTACAGGCGTATTTCTTGAATAGGCTGGGGCAGTTACTGCGGCTGGTGCCTCCGCCAGTGCTGTGGGTTGTGGTGGAGATGAATGCGGCGTCAATGGAGACGGCGGAGTTGCTGAGGAAAACGGGAGTGATGTATAGGCACTTGGTTTGCGCTAAGAACTCGACTGATGTGAAGGACAGAGGAGTTCATCAGAGGAACACGGCGTTGGAGCACATTGAGCGCCATAAGCTTGATGGAATCGTTTACTTTGCGGATGATGATAATGTGTATTCGCTTGAGTTGTTCGATACCTTGAGAGACATCAGTCGCTTTGGCACTTGGCCTGTTGCTATGCTAGCACCCAGCAAGAACAAGGCTATTTTGGAGGGCCCTGTATGCAATGCAAGCCAAGTGATTGGATGGCATACAAACGAGAAAAGTAAAAGACTTCGTAGGTTTCATGTTGATATGTCTGGATTTGCTTTTAATAGCACAATCCTGTGGGATCCAAAGCGATGGCGACGCCCTACTACAAATCCTATTCGACAATTGGATACGGTGAAAGAGGGTTTTCAAGAGACGACCTTTATAGAGCAATTGGTGGAAGATGAGAATCAAATGGAAGGTTCTCCTGTTGGTTGTTCCAAAGTATTGAATTGGCATCTCCATTTGGATTCTCATAACGTAGTTTATCCAAAGGGTTGGCTGCTTCAGAAAAACCTAGATGCTGTGGTCCCTGTCAACTAA 1311 0.5149 MAQFRRTLSPAYHDRQYPNGAGGVLSVSSPSHKFSSTNAKYTSPFPALATSAAALRKFLAGVFVRRYGRKGQWRKALYRCLLCFFVGFMLGMFPFGHHVVVDDVRPSDMSFEIKPPHANAQLLQENHVLKNRVGGKEGTEVVEAAVGGGSDSGRESGFIIDPVSLSVANHHSIAERFDFVPRKQLIVVTPTYNRALQAYFLNRLGQLLRLVPPPVLWVVVEMNAASMETAELLRKTGVMYRHLVCAKNSTDVKDRGVHQRNTALEHIERHKLDGIVYFADDDNVYSLELFDTLRDISRFGTWPVAMLAPSKNKAILEGPVCNASQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRPTTNPIRQLDTVKEGFQETTFIEQLVEDENQMEGSPVGCSKVLNWHLHLDSHNVVYPKGWLLQKNLDAVVPVN* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3082 436 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 184 429 IPR029044 -
Ahy17g3082 436 CDD GlcAT-I 185 413 IPR005027 GO:0015018|GO:0016020
Ahy17g3082 436 Pfam Glycosyltransferase family 43 204 412 IPR005027 GO:0015018|GO:0016020
Ahy17g3082 436 PANTHER GLYCOSYLTRANSFERASES 161 432 - -
Ahy17g3082 436 PANTHER GLYCOSYLTRANSFERASES 52 118 - -
Ahy17g3082 436 SUPERFAMILY Nucleotide-diphospho-sugar transferases 184 429 IPR029044 -
Ahy17g3082 436 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 161 432 IPR005027 GO:0015018|GO:0016020
Ahy17g3082 436 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 52 118 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3082 Ahy-Chr17 132273717 132277773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3082 1 433 Glycosyltransferase AT1G27600 60.183 9.21e-179 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3082 K20869 - gmx:100809892 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3082 17 132273717 132277773 Ahy17g3082 17 132273717 132277773 ECH
Ahy17g3082 17 132273717 132277773 Ahy8g0789 8 15696377 15700369 hybridization