Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3048 ATGGAAGACACTGAGCAGAAACAAATGTTCCGCGACATCGTGCTCCAAGTCGTCATGGTCCTCTTCTTTGTAGTCACGTTCCTGGCCATGCACGGCATCCCTCAGAGGTTCCTCGCCTGGCTCCGCCTCCCAAGGGGACGCTCCGTCCGAGCCAAGCGCCACTTCGTCCGCAGCGCTCAGCTCCTCGCTGAAGCCCGAACCGCCAAGAAGAGCCGATCCTCCAGCTTGAATTCGCTCGCAAACGAAGCCCTAACCGAAGCAGATCGAGCGATCGCGCTCAATCCAAGGGATGCAGCTTCGTACCTACTCAAAGCAATGATCCTCGATCTGCAAGGGTTCCGGACCTCGGCGCTCGATGCAGTCGACGCGGCGCTGTCGCCGCTGGCAGCAAAGTCGCTCGCCGCGGAGGAGAGGGGTGACGCGCTGGTTAAGCGAGCGGAGCTGAAGTTGGCAGTGAGCGAGCGAGGCGAAAGCCGAGTTGACTCGGCGGTTGCCGATTTGACCGAGTCGGTGAAGCTGAACCCGAAGAACGCGAGAGGATGGTGTCTGTTAGGGCAATGCTATGAGGAGAAGGAAATGGAGGACGAAGCGAAGAAGGCTTATAAAGAGGCTCTTGAATTGGAACCGAAGCTTAGTGTGGCTGAGGAAGCGCTCAAGAGGTTGAGTTCTTCATAG 675 0.5807 MEDTEQKQMFRDIVLQVVMVLFFVVTFLAMHGIPQRFLAWLRLPRGRSVRAKRHFVRSAQLLAEARTAKKSRSSSLNSLANEALTEADRAIALNPRDAASYLLKAMILDLQGFRTSALDAVDAALSPLAAKSLAAEERGDALVKRAELKLAVSERGESRVDSAVADLTESVKLNPKNARGWCLLGQCYEEKEMEDEAKKAYKEALELEPKLSVAEEALKRLSSS* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3048 224 ProSiteProfiles TPR repeat profile. 178 211 IPR019734 GO:0005515
Ahy17g3048 224 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 8 221 - -
Ahy17g3048 224 Gene3D Tetratricopeptide repeat domain 139 224 IPR011990 GO:0005515
Ahy17g3048 224 PANTHER - 8 221 - -
Ahy17g3048 224 Pfam Tetratricopeptide repeat 178 210 IPR001440 GO:0005515
Ahy17g3048 224 Gene3D Tetratricopeptide repeat domain 31 138 IPR011990 GO:0005515
Ahy17g3048 224 SUPERFAMILY TPR-like 81 214 IPR011990 GO:0005515
Ahy17g3048 224 SMART tpr_5 178 211 IPR019734 GO:0005515
Ahy17g3048 224 SMART tpr_5 144 177 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3048 Ahy-Chr17 131528259 131529490 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3048 - - gmx:100799725 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3048 17 131528259 131529490 Ahy17g3048 17 131528259 131529490 ECH
Ahy17g3048 17 131528259 131529490 Ahy7g1746 7 64719104 64719766 hybridization