Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3047 ATGATACGAAAGAAAGAAAGAGAGAAACGCAAACGCGTCCCATCCACGAAGCGGCGCAGATTCCGGCATTGGATTTGCCCACAGCCGCATCAGCACACAACACACGCACCAATTCTCTCTCTTCTCTCCACTTTCACAGTTTCACTCCCACAAACACAAACACACATTACACGCAGTCACGCAACACAAACCAAAACACTGATACTCATCACTCTTCAGTTTGAAACTACCCAATCACAGACTATCAACCCTCGTCTTCACCCATGCCCACTATGCCCACTAATGAAGACTTCCAAGCATGAAACTGGATTGTGCAAGAACTTACTTCAGGAGTATGCGCAGAAGATGAATTATGCAATGCCCATGTATCACAGCCAAAAGGATGAAACACCAAGTCGAGCACCCAGATTTACATGTACTGTTGACATTGGCGGTATTCTCTATATTGGGGGAGCGGCAAAAACAAAGAAAGAAGCAGAAATAAAAGCAGCTAGAACTGCTCTGCTAGCTATCCAATCAAGTGCATCTTCTTCCCAAAACCAGTTGGGTCATTCACAGTTGACAGTAATTCCATGCCGGAAACGGGCAGCAGAAACTGTTCCCCCTGTTGATGAGACTTCAAAACCCCCAAAGCCAAAGAAGCGATTTAGGAAGAAATCTTCAAAAAGGAAATTCTCTAAAGATAAGACTGGCCGTAATGCTGAAAATGCAGGCGCTGGAGCAAATATTAATCCTGGGGTAGAGTCACATGCAAATATCAGCAATGAGTCTGGCTTCAAGGAAACAAAATGTGATGGAGCATTCATTTCAGAAGCCATGAAGAGTTCTGAGAATGGGATATTGCTTAATTATTGCGAGAAAGAAGTATTGGTTAAGGAAGGTTCTCCGGTGATGAATGGCAATGGATCTGTTGAAATTGGGAACTCAACAAAATTGCTTTCCAAAGATCCAGAAGCTAGTGTGGAGATGAACAAGCAGCAAGATAATGGAGAAATCATAAACGAACTGTGA 1011 0.4342 MIRKKEREKRKRVPSTKRRRFRHWICPQPHQHTTHAPILSLLSTFTVSLPQTQTHITRSHATQTKTLILITLQFETTQSQTINPRLHPCPLCPLMKTSKHETGLCKNLLQEYAQKMNYAMPMYHSQKDETPSRAPRFTCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQSSASSSQNQLGHSQLTVIPCRKRAAETVPPVDETSKPPKPKKRFRKKSSKRKFSKDKTGRNAENAGAGANINPGVESHANISNESGFKETKCDGAFISEAMKSSENGILLNYCEKEVLVKEGSPVMNGNGSVEIGNSTKLLSKDPEASVEMNKQQDNGEIINEL* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3047 336 MobiDBLite consensus disorder prediction 198 254 - -
Ahy17g3047 336 SMART DRBM_3 105 172 IPR014720 -
Ahy17g3047 336 MobiDBLite consensus disorder prediction 212 226 - -
Ahy17g3047 336 MobiDBLite consensus disorder prediction 315 336 - -
Ahy17g3047 336 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 104 173 IPR014720 -
Ahy17g3047 336 SUPERFAMILY dsRNA-binding domain-like 106 173 - -
Ahy17g3047 336 Gene3D - 98 173 - -
Ahy17g3047 336 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 1 89 295 IPR031147 GO:0003725
Ahy17g3047 336 PANTHER RIBONUCLEASE III 89 295 IPR011907 GO:0003723|GO:0004525|GO:0006364
Ahy17g3047 336 Pfam Double-stranded RNA binding motif 106 169 IPR014720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3047 Ahy-Chr17 131522974 131527147 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3047 - - gsj:114415265 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3047 17 131522974 131527147 Ahy17g3047 17 131522974 131527147 ECH