Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3024 ATGCGCTACACCGGGGATCTAGGGTTTTCGAGCCTGGTCCTTTTGGTGCTGTTGCTGCTGCTGATTTGTCTTGTTTTTCCGGCGATCGGATTCTTTTATGTCCGCCGTAAATGGCGGATTTCAGTGGCTAGGAAGGAAGAGATCAGGAGGCTTCTGATTTTGGCTGCTGAGGAAACTGCCAGGGCCGAGAGAGAGTCCACGTATGGTTACGGTGCCGCGGTGGAAACCGCCGTCAAGAGCAATCAGTGTGCCGTGTGCTTTGTTCCCGCCACCGCACGCTGCGCTCAGTGCAAATCGGTTCGCTACTGTTCGTTTGAGTGTCAAACTCTTCATTGGCGCCAAGGGCACAAATTGGAATGCCGTCTGCAAAGAATCCTTCGGCAGAGTGATGTAGTTAGTGATCTTGGCAACAAGGCAACCGAGCAAGAATTCTCTAGAATCGCTGACCAGAAGTCTGAAATTGCAGGTGCAGAGCATGAAGCGTCCAGTGAAAACCAACAAACTTCAGTCGCTGGTGTTTCTTCTAAAGTTTTATATGGAAAAAATGAAAATGTAAGAGATGAGTGCCTTGCAGGGGGAACTATAACAGATTCTAATTCTGAGTTGTCAAGTAACTCTTTTTCTGGCTTCTCAGCTTCTCCAAGTGCTAGTGAATCATCTGATGACTCCTCTATTTGTGAGAGTGTTATATCAAACGAGCATGACCAATCTGATGGACCGATTTTTGTTGATTCAACACTTGACGTTCCAGATAGCACTTCAAGTGACAGTAGCATGGTTGTAGCTATGTCTTCATCACCCAAATTTGCCAGTTTGGTTGAATCAGTTGATGGTTTTTCGACAATGCGTAAATTAAATGAAAGTAGATCTGGTCTTTGTAAAGAAGAAGGAAAACTTGCAAAAAATGGTACTTCAGGTTCAGGTATGCTGAAGGGGGCAACAATCAAGCCTTCCATAGTGTCTTCCGGGTTCTGGGATAGAACTCTTGGCACAACTGGGATTGAAGAAGATGTCAACAGTGACACTTCTCCATCCCATTCGGATGAATCCACTCACAATACAGGATCTGATTCTCAGTCATTTCGCTTTTCGTTTAGTTCCATCGCTCTTATGCAAGCGCAAGATAGTGAGGCAAAGAATTTTGTATCTGATAATGCTTCTCCCAATACTGTTGGGGACAATGTGCCTTGCTCAGGATCAGCATCAACGGAGAATGACAGAGATACAGTGAATTCTTCAAAGGCTACAAATCTTAAATTCATGAACAGCAAAGATTCCATACTTCCAAACCCTGCTGCTGCCCCTGTTTATGAATCTGATCAATTGGAATCTAAAGGCAGCTCTGTGCAACCCTTATCTTGTCTCTACCCACCATCCCCCAGTCCTAGCAAAGGTTCAGGTTGTGCAGATTCTTTGAACGTCCATAACTTGCAATCGTATATTTCTATGGCATCAAATCGTGTTGTAGGAAACCATGGCATCAATTCTAAGTCTGCTGAAATTAGATGCCTGACACGTGACCTTGATTCTAATTTAGTCTGTAGAACTGATGCTCACTCAAATTCCAGTACAAAACATGTGAATAATGGTAATCAATCTGCCACTAGTACGTCGTCTGGGGGTGTTAGCTGTTCTGCAAATTCTAAGAGTGGCTTGAAATCATCTGTTTTAAAAGTTGTTGATCAGTTCCGAGGATCAAATTTCTCAAAGCAGTTTCCACTAGTTTGGAATGATACCGCAGGAAAACAAAGTGATAAGATGTTGCAGGGTCTTTTTCCTTATGAATTGTTTGTCAAGATTTATAACTCGAACAAGGGGGAGTTTAGCCCATTTGGTCTTATAAATTGTGGGAACAGCTGTTATGCCAATGCTGTACTCCAGTGCTTAGTATTTACACCACCCCTGACTGCATATTTTCTTCAAGGACTACATTCTACAGCATGTGCAAATAAAAAATGTTTCAACTGTGAGTTTGAAAGTTTGATTTTGAAGTCAAAGGATACAAAATATCCACTCTCTCCTAAGGGCATACTCTCCCAACTAAGGAGAACTGGAAGTCAACTTGGTAATGGCAAAGAAGAAGATGCACATGAATTTCTAAGGCATGCCATTGACACAATGCAATCTGTTTGCCTTATGGATGCTGGGGTTGATGTATGTGGTTCATTGGAAGAGGACACTACTTTAATTGGTCTAACATTTGGGGGTTACCTTAGATCAAAGATAAAATGCATGAAATGTGGAGGAAAATCTGAACGTCAGGAAAGGATGATGGATCTTACCGTTGAGATAGAAGGGGACATAGCAACCCTGCAGGAAGCTCTTCGACGATTTACAAGTACCGAGTCTTTGGATGGAGAAAATAAGTACCACTGTGTCAGATGTAAATCTTATGAGAAGGCCAAGAAGAAGCTGACCATTTCTGAGGCACCTAATGTTCTTACAATTGCATTAAAGAGATTTCAGTCAGGAAAGTTTGGGAAGCTTAACAAGCCTATCCAGTTTCCTAAAACTCTTGACTTGGCTCCTTTCATGAGTGGGACTAGTGATAAATCACCTATATACAGACTGTATGGTGTAGTTGTTCACTTGGATATCATGAATGCTGCCTTTTCTGGTCACTATGTGAGCTATGTGAAGAATAGTCAAAACAAGTGGTTCAAGGTTGATGACAGTGTGGTGACACCTGTTGAGGTGGAGAGAGTCTTAACAAAAGGATCATATATGCTTTTTTATGCAAGGTGTTCACCCAAGGCCCCAAGATCAATCAGAGGCAAGACATTGTCCCCAGAATCAAAAGGCAAAGTAACCGGAAAGACCGCAACGAAAACTCGGAATGTATCTATAACTTCTGGTCCTGCTGAATATATCAGTAGTCCAGATGGTTCACCCACCTTGGACTCCTTCTATTCAAAGTTTCACCACCTGAAGAGAGTTTTAGAAGATGACTCGTCAAGTGACAATTCATCGCTAATCAGCAGCAATTCCGACTTAGGTTCTTGCAGCACCGATAGCACTCATGATTCGACTACCACAGATGAGTTCTCCAATTATATTTTCGGTGATTCAAGGGTCGGCTGGGGTAGCCCATGGAGGAACTCCGAATCCGACACCTCATCCTCCACCTCTTCCTCATCTTCTCCCCTGAACTTCAGGCATTCACCCCTAGCCGATGTGGACCGATATGATTCAGTTTCTCATGGTTCAAGTGCAGATATAGATGGCAATTTGTACAGGAACAAAATGGGGCATGCAGAAAGAAAAGGAGGTGTTGTGCCTCTCTCACATTCAGACACTCTACACCATAGGAAGTTAGAAAGTACTAGGATTAGCAGCAACAGTAATTTTAGGGATACTAACTCTCATCAGAGACTAGGATCTAACCATTTTAATGGCATAAGCTCTGGTGCACCTTGTAGAAAACCAAGGGACAGAACGGATTGA 3444 0.4294 MRYTGDLGFSSLVLLVLLLLLICLVFPAIGFFYVRRKWRISVARKEEIRRLLILAAEETARAERESTYGYGAAVETAVKSNQCAVCFVPATARCAQCKSVRYCSFECQTLHWRQGHKLECRLQRILRQSDVVSDLGNKATEQEFSRIADQKSEIAGAEHEASSENQQTSVAGVSSKVLYGKNENVRDECLAGGTITDSNSELSSNSFSGFSASPSASESSDDSSICESVISNEHDQSDGPIFVDSTLDVPDSTSSDSSMVVAMSSSPKFASLVESVDGFSTMRKLNESRSGLCKEEGKLAKNGTSGSGMLKGATIKPSIVSSGFWDRTLGTTGIEEDVNSDTSPSHSDESTHNTGSDSQSFRFSFSSIALMQAQDSEAKNFVSDNASPNTVGDNVPCSGSASTENDRDTVNSSKATNLKFMNSKDSILPNPAAAPVYESDQLESKGSSVQPLSCLYPPSPSPSKGSGCADSLNVHNLQSYISMASNRVVGNHGINSKSAEIRCLTRDLDSNLVCRTDAHSNSSTKHVNNGNQSATSTSSGGVSCSANSKSGLKSSVLKVVDQFRGSNFSKQFPLVWNDTAGKQSDKMLQGLFPYELFVKIYNSNKGEFSPFGLINCGNSCYANAVLQCLVFTPPLTAYFLQGLHSTACANKKCFNCEFESLILKSKDTKYPLSPKGILSQLRRTGSQLGNGKEEDAHEFLRHAIDTMQSVCLMDAGVDVCGSLEEDTTLIGLTFGGYLRSKIKCMKCGGKSERQERMMDLTVEIEGDIATLQEALRRFTSTESLDGENKYHCVRCKSYEKAKKKLTISEAPNVLTIALKRFQSGKFGKLNKPIQFPKTLDLAPFMSGTSDKSPIYRLYGVVVHLDIMNAAFSGHYVSYVKNSQNKWFKVDDSVVTPVEVERVLTKGSYMLFYARCSPKAPRSIRGKTLSPESKGKVTGKTATKTRNVSITSGPAEYISSPDGSPTLDSFYSKFHHLKRVLEDDSSSDNSSLISSNSDLGSCSTDSTHDSTTTDEFSNYIFGDSRVGWGSPWRNSESDTSSSTSSSSSPLNFRHSPLADVDRYDSVSHGSSADIDGNLYRNKMGHAERKGGVVPLSHSDTLHHRKLESTRISSNSNFRDTNSHQRLGSNHFNGISSGAPCRKPRDRTD* 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3024 1147 MobiDBLite consensus disorder prediction 933 959 - -
Ahy17g3024 1147 MobiDBLite consensus disorder prediction 983 1015 - -
Ahy17g3024 1147 Coils Coil 45 65 - -
Ahy17g3024 1147 MobiDBLite consensus disorder prediction 1109 1134 - -
Ahy17g3024 1147 Pfam MYND finger 83 120 IPR002893 -
Ahy17g3024 1147 SUPERFAMILY Cysteine proteinases 609 917 IPR038765 -
Ahy17g3024 1147 MobiDBLite consensus disorder prediction 379 411 - -
Ahy17g3024 1147 ProSiteProfiles Zinc finger MYND-type profile. 83 120 IPR002893 -
Ahy17g3024 1147 MobiDBLite consensus disorder prediction 200 239 - -
Ahy17g3024 1147 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 611 915 IPR028889 -
Ahy17g3024 1147 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 612 627 IPR018200 GO:0004843|GO:0006511
Ahy17g3024 1147 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 16 25 1127 - -
Ahy17g3024 1147 Gene3D Cysteine proteinases 604 925 - -
Ahy17g3024 1147 SUPERFAMILY HIT/MYND zinc finger-like 78 123 - -
Ahy17g3024 1147 MobiDBLite consensus disorder prediction 334 358 - -
Ahy17g3024 1147 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 25 1127 - -
Ahy17g3024 1147 Coils Coil 147 167 - -
Ahy17g3024 1147 MobiDBLite consensus disorder prediction 200 259 - -
Ahy17g3024 1147 ProSitePatterns Zinc finger MYND-type signature. 83 120 IPR002893 -
Ahy17g3024 1147 MobiDBLite consensus disorder prediction 985 1015 - -
Ahy17g3024 1147 Pfam Ubiquitin carboxyl-terminal hydrolase 611 912 IPR001394 GO:0004843|GO:0016579
Ahy17g3024 1147 MobiDBLite consensus disorder prediction 920 959 - -
Ahy17g3024 1147 MobiDBLite consensus disorder prediction 519 542 - -
Ahy17g3024 1147 MobiDBLite consensus disorder prediction 1030 1052 - -
Ahy17g3024 1147 MobiDBLite consensus disorder prediction 1105 1147 - -
Ahy17g3024 1147 Gene3D - 72 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3024 Ahy-Chr17 131001809 131007961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3024 582 933 Miscellaneous Gene Families AT4G31670 48.305 9.62e-114 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3024 K11855 - gmx:100793079 1241.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3024 17 131001809 131007961 Ahy17g3024 17 131001809 131007961 ECH
Ahy17g3024 17 131001809 131007961 Ahy7g1729 7 63594061 63601158 hybridization