Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3016 ATGGGTTCCACACTCGTCTCTGCTGCGCCTTCTGGAACATTCTCCTCCACAATACGACGTCGTCTGCCACTCGTAGGTGCGTTTTGCATGCTCAGCTTGGGCATCACCAACCTCTACACTCCCTTGTCTTCCTCTGCCTTCAAAACGGGATCGAAATTCAGTGGCGCCACTCGCTCTATCAGAATGGAAGCAAGCAACAACAACACTGTTCCAAGCATCGTTGTTTACGTCACTGTTCCCAACAGAGAAGCAGGGAAGAAGTTGGCTGAGAGCATTGTCAAAGAAAAGCTTGCAGCTTGTGTCAACAGAGTACCCGGTATCGAATCAGTGTACCAGTGGAAGGGAGAGATCCAAACTGATGCGGAGGAACTTCTTATAATCAAGACTAGGCAATCCCTTCTGCAAGCACTTACAGAGCATGTCAAAGCAAATCATGAATATGATGTGCCAGAAGTAATATCCTTACCCATCACAGGGGGGAACCTCAAGTATTTAGAATGGATCAAGGAGAGCACAAGGGAGTGA 525 0.48 MGSTLVSAAPSGTFSSTIRRRLPLVGAFCMLSLGITNLYTPLSSSAFKTGSKFSGATRSIRMEASNNNTVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNRVPGIESVYQWKGEIQTDAEELLIIKTRQSLLQALTEHVKANHEYDVPEVISLPITGGNLKYLEWIKESTRE* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3016 174 Gene3D - 63 174 IPR015867 -
Ahy17g3016 174 Pfam CutA1 divalent ion tolerance protein 73 170 IPR004323 GO:0010038
Ahy17g3016 174 PANTHER DIVALENT CATION TOLERANCE CUTA-RELATED 10 173 IPR004323 GO:0010038
Ahy17g3016 174 SUPERFAMILY GlnB-like 72 173 IPR011322 -
Ahy17g3016 174 PANTHER PROTEIN CUTA CHLOROPLASTIC 10 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3016 Ahy-Chr17 130855711 130858146 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3016 K03926 - gmx:100792337 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3016 17 130855711 130858146 Ahy17g3016 17 130855711 130858146 ECH
Ahy17g3016 17 130855711 130858146 Ahy8g0719 8 14143514 14146009 hybridization