Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3009 ATGAGTACTCCTTCTGATCAAACCACAAACGAAGCTAAAACAACAACACCACCACCGCCGCCGCCGAATGATTCTCCGTCTCAGTCTCAGTCTCAGCCTCACTCCACCGATTATGCTCCATACCCTAAAATTGACCCCAACGATGTTACTCCTCCTTTGCCACATCATCCTAATTTGACTTCTGAGCCGTTGCAACCGGTTACTAGTCCCGTCGCCGCTGAAACTCGCGCTCCGATTTCCGGCGACGCTGCAACCACCATGCCTCCCGAGTCCAATCCCTATGTCTCCCCTGCACCTGTTCAGCCATCAAAAAATACTTTGGATTCGGTGAAGGATGTTCTTGGAAGATGGGGGAAGAAAGCCGCTGAAGCTACCAAGAAGGCCCAAGATCTATCTGGAAATATGTGGCAGCACTTGAAGACTGGTCCTAGTTTTGCTGATGCTGCTGTTGGGAGGATTGCTCAGAGCACAAAGGTTCTTGCAGAAGGTGGCTATGAGAAGATCTTCAGGCAAACTTTTGAGACTGTTCCGGAGGAGCAGCTCTTGAAAACGTATGCGTGCTACTTGTCCACCTCGGCCGGACCGGTAATGGGAGTTCTGTATTTGTCAACTGCAAAGCTTGCTTTTTGCAGTGATAACCCACTTTCTTACCAAACGGGTGATCAGACTCAGTGGAGCTATTATAAGGTGGTCATTCCGTTACATCAGCTGAGAGCGGTGAACCCATCAGCAAGCAAAACCAACCAATCGGAGAAATATATACAGATCATCTCTGTTGACAACCATGAATTTTGGTTCATGGGCTTTGTTCACTATGACAGCGCTGTTAAAAATATTCAAGGAGTGTTGCAAACCCGTTGA 861 0.482 MSTPSDQTTNEAKTTTPPPPPPNDSPSQSQSQPHSTDYAPYPKIDPNDVTPPLPHHPNLTSEPLQPVTSPVAAETRAPISGDAATTMPPESNPYVSPAPVQPSKNTLDSVKDVLGRWGKKAAEATKKAQDLSGNMWQHLKTGPSFADAAVGRIAQSTKVLAEGGYEKIFRQTFETVPEEQLLKTYACYLSTSAGPVMGVLYLSTAKLAFCSDNPLSYQTGDQTQWSYYKVVIPLHQLRAVNPSASKTNQSEKYIQIISVDNHEFWFMGFVHYDSAVKNIQGVLQTR* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3009 286 PANTHER GEM-LIKE PROTEIN 2 26 285 IPR037848 -
Ahy17g3009 286 SMART gram2001c 167 244 IPR004182 -
Ahy17g3009 286 MobiDBLite consensus disorder prediction 1 106 - -
Ahy17g3009 286 MobiDBLite consensus disorder prediction 45 59 - -
Ahy17g3009 286 PANTHER GEM-LIKE PROTEIN 1 26 285 - -
Ahy17g3009 286 MobiDBLite consensus disorder prediction 85 106 - -
Ahy17g3009 286 CDD PH-GRAM_GEM 178 284 - -
Ahy17g3009 286 Pfam GRAM domain 168 284 IPR004182 -
Ahy17g3009 286 Gene3D - 165 285 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3009 Ahy-Chr17 130645365 130648397 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3009 - - aprc:113865936 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3009 17 130645365 130648397 Ahy17g3009 17 130645365 130648397 ECH
Ahy17g3009 17 130645365 130648397 Ahy8g0707 8 13857532 13860280 hybridization