Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3002 ATGAGTGAATCCATGTCTATGGCTGCTGCGTTAAACCCTCCCAAAACCCCCTTCAAAATCAACCTCACACCCGCTCTTCCGCCTCCCCCAACCTCCTCCGCACTCACTTTCAAACCAAACAACAACTTCCCCACACTCTGCGCCGCCGCACAACCACAACAACAAGAACACGCCGCTCTGCTTGACACTCTACTCAACAGCACCCGCAAGAACCAAGTGCTCCACTCCATCAGAACCACATCCCCCTTCAACTGCCTCTCCGAAACAAATCTTCACCATACAGTTCCCGCCCTCACCTCCAAAACCAGGGGAAAGGTTAGAGACATATATGATAGTGGAGAGTACCTTGTTCTGGTTACTACTGATCGCCAGAGTGCATTTGATAGAGTCCTTGCTTCAATTCCCTTCAAGGGACAGGTGCTTAACCAGACAAGCTTGTGGTGGTTTGAGAGAACCCAACATATAACTGCTAATGCCGTTGTGTCCACTCCTGATCCTAATGTTACCATAGCAAAGAAATGTTCTGTTTTCCCTGTTGAGTTTGTTGTCTACAATAAAGGCATCCGGAACTATTGTGGCAATGCCCTCCCGGATGGTTTGGTAAAAAACCAAAAGCTGGCTGAAAATATACTCACACCTACAACCAAAGCTGCAGATCATGATGTTCCTGTAACTCCAGATGAGATTATAGAAAGGGGATTAATGACAAGAGCTGATTATGAGGAAGTCAGCAGAAAAGCTTTAAGTCTGTTTGAATACGGTCAGCGTGTGGCTTCAGAACATGGCCTTATATTGGTTGATACAAAGTATGAATTTGGGAAGGCAGAGGACGGTTCAATTATGTTGATTGATGAGGTGCACACTCCTGATTCAAGTAGATATTGGATTGCCAGTTCTTATCTTGAGCGCTTTCAAAATGGTTTGGAGCCTGAAAATGTTGATAAGGAGTTCTTGAGGCTGTGGTTCAAAAATCACTGCAACCCTTATGAAGATGAGGTTCTTCCTGAAGCTCCTGAAGATCTTGTTTGCGAATTGTCTTGGCGATACATTTTCTTGTATGAGACTATAACAAAATCAAAGTTTGAGGTGCTGTTGTCTGAGGAGCCAATACATGAGCGAATATCACGAAATGTTGCATCTGCACTGGCATCTTTGAAGTAA 1161 0.447 MSESMSMAAALNPPKTPFKINLTPALPPPPTSSALTFKPNNNFPTLCAAAQPQQQEHAALLDTLLNSTRKNQVLHSIRTTSPFNCLSETNLHHTVPALTSKTRGKVRDIYDSGEYLVLVTTDRQSAFDRVLASIPFKGQVLNQTSLWWFERTQHITANAVVSTPDPNVTIAKKCSVFPVEFVVYNKGIRNYCGNALPDGLVKNQKLAENILTPTTKAADHDVPVTPDEIIERGLMTRADYEEVSRKALSLFEYGQRVASEHGLILVDTKYEFGKAEDGSIMLIDEVHTPDSSRYWIASSYLERFQNGLEPENVDKEFLRLWFKNHCNPYEDEVLPEAPEDLVCELSWRYIFLYETITKSKFEVLLSEEPIHERISRNVASALASLK* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3002 386 CDD SAICAR_synt_Sc 103 357 - -
Ahy17g3002 386 Hamap Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 98 358 IPR028923 -
Ahy17g3002 386 PANTHER BNAC03G41880D PROTEIN 51 385 - -
Ahy17g3002 386 Pfam SAICAR synthetase 102 333 IPR028923 -
Ahy17g3002 386 ProSitePatterns SAICAR synthetase signature 2. 265 273 IPR018236 GO:0004639|GO:0006164
Ahy17g3002 386 SUPERFAMILY SAICAR synthase-like 93 361 - -
Ahy17g3002 386 Gene3D - 180 306 - -
Ahy17g3002 386 PANTHER PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE SYNTHASE 51 385 - -
Ahy17g3002 386 Gene3D Phosphorylase Kinase; domain 1 85 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3002 Ahy-Chr17 130572492 130576611 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3002 K01923 - gmx:100801209 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3002 17 130572492 130576611 Ahy17g3002 17 130572492 130576611 ECH