Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2990 ATGGCCCAACAGAAAAATAAGCTAAGGAATTTGGCTTACAATATCAAAGACAAAGCCTCCGTTATAGTCGCCACCCTCTCCATCAAGCGCCACGTGTCCTCCGTCCGAGTCCGCGTCCTCCGCGCCACTACCCACGCTCTCAGCGGCCCTCCCTCCGAGGATCGAATCGCCGCCGTTCTTGCCGTCGCATCATCCAACAACACCTCCCACCTCCTCCCCCGTGTCTGCATCGACGCCCTGATGGACCGCCTCCACCGCACCGGCAGTGCCACCGTGGCACTCAAGTGTCTCTTCACCCTCCACAACGTCGTCGTCAAGGGACCGTTCACCCTCAAAGATCAGCTCGCCTATTACCCTTCCTACGGCGGCCACAACTTCCTTAACCTCTCAACCTTCCGCGATGACTCGGACTTGGAATCGCTCCAACTCAGTGACTGGGTTCGTTGGTACGCCGGAGTCATAGAACAAAGCCTAACCGTTTCAAGAATCCTAGGCTATTATCTCCGATACTCATCATCTTCTTCTTCTAACACCATCCAAGAAACAAACTCTTTGACTCTTGGAACTTCAAACGCGGATTTACTGTACAAGATAGAAGCTCTGGTTGCGTTCTTGGAACAGCTAGGTAAGGTTCCAGAGTCATTGCAGCTTCAGAAGAAGGAGCTGGTTTACGAAGTGGTGAAGCTTGTAGGGGAAGATTACAGAAGCGTTCAGAGAGAGATAGTGATGAGGTTGGAGGAGATGGAGGGTAGAATGGAGAATTTGGATGTTGGTGAAGTGAGTGAGTTGGTTGGGTATGTGAAGAGGATGGAGGAGTGTAAGGAGAAGCTTGTGATGCTGTTCGTTAATAAAGGGAGGAACGGTGGCTTCTGGGATTTGGTTAGAGAAACGAAGGAGAAAGGGTTGAAGATCAAAGGGGAAATTGAAGGCAAGTGGCTCACGGTGGTGGTGGCTTCCAACACCGCCGCCGATTCCATCCGGTTTAACACTAACCCGTTTCTTGAACCCGGTCAAACCAGTCCGGTCCCACTCACCAGTTTTGCTTTAGCAACGGTAAGATGA 1062 0.516 MAQQKNKLRNLAYNIKDKASVIVATLSIKRHVSSVRVRVLRATTHALSGPPSEDRIAAVLAVASSNNTSHLLPRVCIDALMDRLHRTGSATVALKCLFTLHNVVVKGPFTLKDQLAYYPSYGGHNFLNLSTFRDDSDLESLQLSDWVRWYAGVIEQSLTVSRILGYYLRYSSSSSSNTIQETNSLTLGTSNADLLYKIEALVAFLEQLGKVPESLQLQKKELVYEVVKLVGEDYRSVQREIVMRLEEMEGRMENLDVGEVSELVGYVKRMEECKEKLVMLFVNKGRNGGFWDLVRETKEKGLKIKGEIEGKWLTVVVASNTAADSIRFNTNPFLEPGQTSPVPLTSFALATVR* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2990 353 Gene3D - 7 167 IPR008942 -
Ahy17g2990 353 SUPERFAMILY ENTH/VHS domain 35 165 IPR008942 -
Ahy17g2990 353 CDD ANTH_N_AP180_plant 36 161 - -
Ahy17g2990 353 PANTHER CLATHRIN ASSEMBLY PROTEIN 4 342 IPR045192 GO:0048268|GO:0072583
Ahy17g2990 353 ProSiteProfiles ENTH domain profile. 27 168 IPR013809 -
Ahy17g2990 353 Pfam ANTH domain 36 281 IPR011417 GO:0005543
Ahy17g2990 353 PANTHER CLATHRIN ASSEMBLY PROTEIN 4 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2990 Ahy-Chr17 130373545 130375118 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2990 - - gmx:100804881 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2990 17 130373545 130375118 Ahy17g2990 17 130373545 130375118 ECH
Ahy17g2990 17 130373545 130375118 Ahy8g0695 8 13656277 13657827 hybridization
Ahy17g2990 17 130373545 130375118 Ahy17g2990 17 130373545 130375118 PCT
Ahy17g2990 17 130373545 130375118 Ahy8g0695 8 13656277 13657827 PCT
Ahy8g0695 8 13656277 13657827 Ahy17g2990 17 130373545 130375118 PCT