Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2987 ATGGATCTTCCGCGAGAGGTAGATGATTACATCAAAGAAACCATAGATGATTTCTTGGGTCTACCGATTTCGTCGAAAACCCTAGTAACAAAGCTCCGAGCATCGCGAGAGTCTGAACGGCGACTCCAAGAACAGAACCTTTATCTTCTCTCCAAATTGAAGCAGAAAGACGAACTCGTCGAACGAACTAAGTGTGAATCGAGTATGAATGCTCAAGCCCTGAAGAAGTTCGTTGAGGAGAATCAGAGGTTGGCCATGGAGTGTGAGAATTTGCTGGCCAAATGCCAGAATTTGGAGAATGAGTGTGTACTGTTTGAGCACGACAGAGAGGCGTTGATGGAATTTGGGAACGATGCCGATGGAAGGGCGAGGGAGGCTCAGTCACGTGTCCTAGATTTAGAGCGGGAGCTGCTGTTGTTGCAGGAAGAATTTAGGAAATACAAGACTTACCATGAATTGGCTGATACTTCTTCTACATTCACACTTGAGGAAGAGAATCTACTTGACTCTCTTTTTGCAACTATTAGTAGTGGAGATGATTACTGTACATACACATTTTTGGAAGCAAATTCTAAGGATGAATACTGTAAGAAGTTGCTGACTATGTGGGACTGCTTAAAGCCCTCAACCCAGAAAGTTTTGTCACTAGTTGCCAAAGTCAAATCACTTGAGAAAGATAAGGAGCATCTGACAACCAATCTTCTCAAAGCTGAGGAGGAGGTCAAATTACTTTTTAATGAAAATAACACCTTGGAGAAAGAGAACAAAGTGCTATTGAAGTATTACAAGGAAAGAAACCATCCAAGTTCTGGTGAGAAACATACCAGCAGTGCATCTGCAAAGTCAAACAAGAGGAAGTCTAGTCCCAGAACAAGTAACCCGATAGACAGGAAGCTTGATTTTGATGATATAGATTCAACACGACAACCATTGTCGCCCTTGCGAATGAACTCGCCAGATTGTAGAATGCATAAGAAATAA 981 0.423 MDLPREVDDYIKETIDDFLGLPISSKTLVTKLRASRESERRLQEQNLYLLSKLKQKDELVERTKCESSMNAQALKKFVEENQRLAMECENLLAKCQNLENECVLFEHDREALMEFGNDADGRAREAQSRVLDLERELLLLQEEFRKYKTYHELADTSSTFTLEEENLLDSLFATISSGDDYCTYTFLEANSKDEYCKKLLTMWDCLKPSTQKVLSLVAKVKSLEKDKEHLTTNLLKAEEEVKLLFNENNTLEKENKVLLKYYKERNHPSSGEKHTSSASAKSNKRKSSPRTSNPIDRKLDFDDIDSTRQPLSPLRMNSPDCRMHKK* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2987 326 PANTHER EARLY ENDOSOME ANTIGEN 1 326 - -
Ahy17g2987 326 PANTHER PLANT PROTEIN MATCH IS: (TAIR:PLANT.1) PROTEIN, PUTATIVE-RELATED 1 326 - -
Ahy17g2987 326 Coils Coil 220 254 - -
Ahy17g2987 326 MobiDBLite consensus disorder prediction 290 305 - -
Ahy17g2987 326 MobiDBLite consensus disorder prediction 266 326 - -
Ahy17g2987 326 MobiDBLite consensus disorder prediction 272 289 - -
Ahy17g2987 326 Coils Coil 74 108 - -
Ahy17g2987 326 Coils Coil 123 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2987 Ahy-Chr17 130273129 130275447 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2987 - - gmx:100789907 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2987 17 130273129 130275447 Ahy17g2987 17 130273129 130275447 ECH
Ahy17g2987 17 130273129 130275447 Ahy8g0691 8 13557156 13559537 hybridization
Ahy17g2987 17 130273129 130275447 Ahy17g2987 17 130273129 130275447 PCT
Ahy17g2987 17 130273129 130275447 Ahy8g0691 8 13557156 13559537 PCT
Ahy8g0691 8 13557156 13559537 Ahy17g2987 17 130273129 130275447 PCT