Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2979 ATGTGTTATTGTAGCGATGGCCGTTCAAATGAACACAGAAAAGCCGCAAACTCTGCACAACCGCCACTAACGGTGATGCAACTGCCGAGGCGCGTGGCGGTTCCATTTGCCATCCTGAGGAGGTTACTAATTGCCACCGGATCCTTCTTAGCGGTTACCACTCTCTTATTCGTCCATGTTCAAGTTCCATCTTCTTCTTCTTCGTCTTCCTCTGACTCTCATCGTAACTACTTCACTGACAAGTTTCCCGCGTTTCGTGATCCGCAAAGATGGACGAGAGAGCAAGCGCCGCCGTATTTATCCAAGGCTACATTTGCTGCTTCCAAGTTGAATGATTCAAGATGGGATTCAGATTATGAGAAACTGTGGAAACCTCCACCAAATCATGGCTTTCTGCCCTGCACTAAGCCTACTCCTAATTATAGAACTTATCCCGAATCGCGAGGTTACCTTTTAGTTCATACAAATGGAGGTCTCAACCAAATGCGTACCGGGATATGTGATATGGTAGTTGTAGCTCGCATCATAAACGCCACTCTTGTAATTCCGGAACTTGACAAGAAATCATTTTGGCAGGACAATAGCAATTTCTCTGATATCTTTGATGAAGAGTGGTTCATTAATTCTTTAGCTAATGATGTAAAAATCATTAAGAAGCTACCTAAAAATCTAGTTCATGCCACCAAAATGGTGATCCAATTCAAAAGCTGGTCTGGAATGGATTACTATGAGAATGAGATTGCTTCCATGTGGGATTTTTACAAAGTTATTCGAGCTTCCAAAACTGATTCTCGGTTGGCAAATAACAAACTACCTTCGGATATTCAGAAGCTTCGTTGCCGAACTTGTTTTGAAGCTCTTCGTTTCTCTCCTCGAATTGAACAAATGGGGAAGATTTTGGTGGAGAGGATGAGATCATTTGGTCCTTATATCGCGTTACATTTACGCTATGAGAAGGATATGCTTGCATTCAGTGGTTGCACACATGATTTATCTACAGCCGAAGCGGAAGAGTTAAGGATTATCAGAGAGCACACTGCATATTGGAAGAGGAAGCACATTGATCCCATTGAAGAGAGGTTAAAAGGACTTTGCCCCTTAACTCCAAAAGAAGTTGGGATTTTTCTTACTGCTCTAGGATATCCTTCAAGTACTCCAATATACATTGCTGCTGGGGAAATATATGGGGGTGAGTCGCATATGGCTGAACTGCGATCGCGGTATCCATTGTTAATGAGCAAGGAAAAGCTTGCTTCTGTTGAGGAGCTTGAACCCTTTTCCATCCATGCATCTCAAATGGCTGCTCTTGACTATATTGTATCGGTCGAAAGTGATGTTTTTGTACACTCTTACCCGGGAAACATGGCCAGGGCTGTCGAAGGTCATCGTCGATTTCTCGGCCGTGGAAGGTCAATTTCTCCAGATAGGAAAGCCCTTGTTCGTCTCTTTGATAAACTAGCTAATGGAAAAATGACTGAGGGGATAAATCTATCAAATAAAATTATTGATCTTCATCAAAAAAGGCAAGGCTTGTTAAGGAAGAGGAAAGGGCCCATTTCAGGAACAAAAGGGTTGGACAGGTTTCGATCTGAAGAAGCATTTTATTCGAATCCTTTACCTGATTGTATATGTCAAACACCAACACCAACTGCAAATGCTTCTCACGTTGTTAGGTAG 1677 0.4252 MCYCSDGRSNEHRKAANSAQPPLTVMQLPRRVAVPFAILRRLLIATGSFLAVTTLLFVHVQVPSSSSSSSSDSHRNYFTDKFPAFRDPQRWTREQAPPYLSKATFAASKLNDSRWDSDYEKLWKPPPNHGFLPCTKPTPNYRTYPESRGYLLVHTNGGLNQMRTGICDMVVVARIINATLVIPELDKKSFWQDNSNFSDIFDEEWFINSLANDVKIIKKLPKNLVHATKMVIQFKSWSGMDYYENEIASMWDFYKVIRASKTDSRLANNKLPSDIQKLRCRTCFEALRFSPRIEQMGKILVERMRSFGPYIALHLRYEKDMLAFSGCTHDLSTAEAEELRIIREHTAYWKRKHIDPIEERLKGLCPLTPKEVGIFLTALGYPSSTPIYIAAGEIYGGESHMAELRSRYPLLMSKEKLASVEELEPFSIHASQMAALDYIVSVESDVFVHSYPGNMARAVEGHRRFLGRGRSISPDRKALVRLFDKLANGKMTEGINLSNKIIDLHQKRQGLLRKRKGPISGTKGLDRFRSEEAFYSNPLPDCICQTPTPTANASHVVR* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2979 558 Pfam GDP-fucose protein O-fucosyltransferase 150 465 IPR019378 -
Ahy17g2979 558 PIRSF UCP009360 5 548 IPR024709 -
Ahy17g2979 558 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 26 556 - -
Ahy17g2979 558 CDD O-FucT_plant 150 471 IPR024709 -
Ahy17g2979 558 PANTHER OS02G0726500 PROTEIN-RELATED 26 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2979 Ahy-Chr17 130178484 130183188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2979 94 545 Miscellaneous Gene Families AT1G22460 67.257 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2979 - - adu:107460899 1095.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2979 17 130178484 130183188 Ahy17g2979 17 130178484 130183188 ECH
Ahy17g2979 17 130178484 130183188 Ahy7g1674 7 59882570 59888429 hybridization
Ahy17g2979 17 130178484 130183188 Ahy17g1834 17 51189984 51195736 PCT
Ahy17g2979 17 130178484 130183188 Ahy8g0684 8 13458726 13463035 PCT
Ahy17g1834 17 51189984 51195736 Ahy17g2979 17 130178484 130183188 PCT
Ahy8g0684 8 13458726 13463035 Ahy17g2979 17 130178484 130183188 PCT