Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2963 ATGGCTTCGCGCTTTTTCTTCCTCCTCCGTACCAACGCCATCAATAAATCCTCCAAAGCCCTAATCCCAACCCTTCCAAACCCTATTTTCTCCATTTTCAGTTCGCAATTGTCCACCTCCTTCCTCGTCACCAAAACCCCAAAGAAGCTCCGAAAGAAGCGCAAGAAAAAGGACAGTCCAAGAACCAAGCTCGTTCAGACCCAACCCAACCTCATTCCTCACCTTGAGCGCATTGTCGAACGCGACGCGCTCTTCAGATTCATCAACAAAACCAAGCAATTCCTCTCCGCCCAACCGGAGCACGTGCTACGCCTCGACGACGCCGGGAAACTCCATCGCGAGCTAGGGTTCCCTCGCGGCCGCAATGTCACGCGCTTCATCCTCCGCCACCCGCTCCTCCTCCAGACCTACCGCCACACCGACGGCAAGATGTGGTTAGGGTTCACTGATCTCATGGAAGACCTTCTCTTGGAGGAGCAAGCAATCATGGATTCCATGGAGCAAGACCGCGTTGCAAAGGTACGAAAATTGCTCATGATGACGTCACAAAAGCGTGTTCCTTTAAGCAAAATTCACCACTGTAGAACCTTGTTCGGCATACCTGACGATTTCAGGGACCGGGTGAAGAAATACCCGAATTACTTTCGGGTTGTGGATGGTGGTGGCGGGAAGAGGGTCCTTGAGTTGGTTAATTGGGATCCTCTGTTAGCGGTGACCGCAATTGAGAGGGGATTCGTGGTTAATGAGGATGGTGCTAAGAGGAAGTTTAGGTTTCCTGTGAAGTATGGTCGGGATTTGGGTTTGGAATTGGAGGATACTAGGAAGCTGAACTTGTTGAACACTTTGCCTTTGGTTTCGCCTTATTCGGATGGGTCGAAGTTGGATGTGTGGACCATTGAAGCGGAGAAGTTTAGGGTTGGTGTGGTTCATGAATTTTTGAGCTTGACATTGGAGAAGAAGGCATCAATTCACCACCTTGTGGAGTTCAAGGAAGAGTTTTGTTTGACAAAGCATACTTACCATATGCTGTTGAAGCAGCCAAGGGCATTTTATTTGGCGGGGACTGAGATGAACTGGGTTGTGTTCCTGAAGGATGCTTATGATGAGAGTGGTAATTTGGTTGATAAGGATCCACAGGTGGTGTTCAATGAGAAGTTGTTTAAGTACGCTCAGATGCAAGAAATGGGAACTGGTTCTGAGGCTATGGAAATGGAATGA 1218 0.4893 MASRFFFLLRTNAINKSSKALIPTLPNPIFSIFSSQLSTSFLVTKTPKKLRKKRKKKDSPRTKLVQTQPNLIPHLERIVERDALFRFINKTKQFLSAQPEHVLRLDDAGKLHRELGFPRGRNVTRFILRHPLLLQTYRHTDGKMWLGFTDLMEDLLLEEQAIMDSMEQDRVAKVRKLLMMTSQKRVPLSKIHHCRTLFGIPDDFRDRVKKYPNYFRVVDGGGGKRVLELVNWDPLLAVTAIERGFVVNEDGAKRKFRFPVKYGRDLGLELEDTRKLNLLNTLPLVSPYSDGSKLDVWTIEAEKFRVGVVHEFLSLTLEKKASIHHLVEFKEEFCLTKHTYHMLLKQPRAFYLAGTEMNWVVFLKDAYDESGNLVDKDPQVVFNEKLFKYAQMQEMGTGSEAMEME* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2963 405 PANTHER OS09G0473400 PROTEIN 1 399 - -
Ahy17g2963 405 Pfam Plant organelle RNA recognition domain 73 394 IPR021099 GO:0003723
Ahy17g2963 405 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 1 399 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2963 Ahy-Chr17 129794990 129797195 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2963 - - adu:107460874 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2963 17 129794990 129797195 Ahy17g2963 17 129794990 129797195 ECH
Ahy17g2963 17 129794990 129797195 Ahy8g0668 8 13128986 13131593 hybridization