Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2961 ATGGCGACGGCGTCAGAGCCCTCCGCCTCCGCCGCAGACGACGAGGAACGCCGCCGCTCCCTTCAAATCGAGTCTCTCCATCTCGTGGACTTCCGCCAACTCTCCCAATCGGAGCTTTACTCGCTCTCCCTAACCTCCTCACCCGCCCAACACCGTTGCCAAGACGACGCCGTAATCCCTAAAATCGACCGCTCCGTCTTCAACGAGTCCGCCGGCAGCCGCAAGCAGACGTTCTCCCGCCTTCGCCTCGTACCGCGTGGTAAGCAACCCAAACCCGCCCCTTCCCCTCCCGCCTCCGCCGCCCACATTCCCCTTGACGAAGAAAACTCCAAAATCATAGAAATGCTTCAGAAGCTCTTCGGCGTGGAGTCTCTCCGCACCGCCGCGCGAGACGGCGGGGGAGGAGGCAGCAGCGTAGGCTATAACGCACTCGTCCCCTTCCAGGGGGAGTTCAAGTCACCGGAGCCGAACGTCTTCGCGCTCCAGAACATTCCGATCTGCGACGTCGCGGACGATAGCGCGATGAAGAAGCGGAAGCGAGGGCGGCCGCGGAAGAACGAGAATTCGATGGCGATTGTGCCAGTAGCATCGCCTCTTCCTCCGCCGCCTCCACCGAAGAAGAAGGAAGATGGTGAGGGTTTTGTTGACCCGGTTTTGGAAGAGGTGAAGAAGAGGACGGTGGGGTTAGAGAATGAGGCTCAGGTTGTTGAGTTCTTGGAGGGTTTGAAGGGAGAGTGGAGTAGTCAAAGGAAGAAGAAGATGACTGTCGAGGCGAGTGAGCTTGGTTCTTTCTTGCCGGCTGGGTGGAAGGTCTTGCTTTCTGTCAAGAAGAGAGCCGGTCGTGCTTCCATTGTTTGTCGCCGTTACGTAAGCCCTTATGGGCAGCAGTTTGAGTCGTTCAAGGAAGTCTCTGCACACTTGCTTTCGTTTTGTGGAGAAGATATAAATATTGTAAAATCTAGTTATCCCGATGACAGTCCGCAGTATAATATCAATGTGCCATCTGGAAGTGTTCTTTGTTACGGCCCTGCTGGAGACGTAAAGCCTGATGCTGATGCAAGCTGTCTAAGTTTAGCTAGAACATCTGTAGAATCTCACCATAAAACGCAAGTTAGTGTTCCATCATCAACTGAAAGAGAGAAGCTAAACACTCTGAATGAGAATTCCAGTAGCTCTTTGGCTGGGGGTTGTAAATTAGGAGATTTTATTGGTGGAGTCTTTGACTATCAAACTGCAAATTATCGATCCATGATGGATGGTACCCATAATGTAAATTCAGTTCGCGGATGTTCAATTGAGGAAGATAGAGTTCTAAATCAGAACACGGTTGATATCATTGAAGTTAGTGGTGCTGCCTGCAATCCTATTCCTTTGGTTCTCCCAACTCCTGTCACCAATAATGAGAGTGGTATTATTCAACATTGTGATGAAATGAATTCTGTGACGTGCATAAGAAATGGTGTTAGTGATTTTAGTACCAAATGCCATGAAACTGCTCCCTGGGGAAATGCACAAACACTTGTTGACAACAATGGGGATGGTGTTTCTGAGAGACTAGTGGAAGATGAGCAGAATGTAGGTTCTGGAAGCAACAGGCCTTTTCCAAATGCTGAGGGGAAACGGTTTATAGGCAACAATTTAGAGATTAGTGATGGAAAGCTTGCTAAGGATGACAAGCAACACATTTTGTGTAGTGATCAGTCTGAAGTTAAAGATGTTTCTAGTAATTCTCAATTGCAGAGTAGTTCTGATGGATTTTCTCTTCCTCCATCTCAGAAAGAAATGAAACATTTTTCTATAAATAGTTCAGACAGAATGCAAAGTTTTATGCTGACAGAGTCTGCTATCGGAGACTGTTTTGACGGTGAATTATTACCTATTGACAAGAGAATTTCCCTTCCCACTGGCCACACAAATAATGTTTCTTTAAGCACGTGCACAGAAGGTGCCTCTGACTGTGGTGGGGTTGATGTTGCCCCTAATCTTTCAGTAGGAAATAATGTCAATGATAATCACGATCCTCCAACTGTTGAGCTTGTGACAAGCTTTGCAGAGGAAAAGAATCCATTGAATGACCAAAATCACAGAATAGACTATTTGTTGCAGACAAGTTCGAAATGTAACTTACTAACTCCTCCTGATGATGAGCAACCCTCGATTTTTGAAAATCTGTATGATATTTCTGCTGGTACCTTTGATGCTGCTTTCATGGAGCCTCAATTAGGGCTTGGTTCTCACAATAATGATGTTGCAATAGATACATATGCTAATGAAAGCATTATGCAGGGAACATTGCAAGGTTGTGAATCTGTTGCTCTTGGTAGCAGTGTTTTAAACCCATTTGATAAGCAAAGTGATAATGCAAATAAATCTTGCTTATCAGAGAATGCCAAGAGTGAGCAAGTTGACATACTTCAAACCAACTCTATGGGTATGCCTGACTTTCATTAG 2451 0.4655 MATASEPSASAADDEERRRSLQIESLHLVDFRQLSQSELYSLSLTSSPAQHRCQDDAVIPKIDRSVFNESAGSRKQTFSRLRLVPRGKQPKPAPSPPASAAHIPLDEENSKIIEMLQKLFGVESLRTAARDGGGGGSSVGYNALVPFQGEFKSPEPNVFALQNIPICDVADDSAMKKRKRGRPRKNENSMAIVPVASPLPPPPPPKKKEDGEGFVDPVLEEVKKRTVGLENEAQVVEFLEGLKGEWSSQRKKKMTVEASELGSFLPAGWKVLLSVKKRAGRASIVCRRYVSPYGQQFESFKEVSAHLLSFCGEDINIVKSSYPDDSPQYNINVPSGSVLCYGPAGDVKPDADASCLSLARTSVESHHKTQVSVPSSTEREKLNTLNENSSSSLAGGCKLGDFIGGVFDYQTANYRSMMDGTHNVNSVRGCSIEEDRVLNQNTVDIIEVSGAACNPIPLVLPTPVTNNESGIIQHCDEMNSVTCIRNGVSDFSTKCHETAPWGNAQTLVDNNGDGVSERLVEDEQNVGSGSNRPFPNAEGKRFIGNNLEISDGKLAKDDKQHILCSDQSEVKDVSSNSQLQSSSDGFSLPPSQKEMKHFSINSSDRMQSFMLTESAIGDCFDGELLPIDKRISLPTGHTNNVSLSTCTEGASDCGGVDVAPNLSVGNNVNDNHDPPTVELVTSFAEEKNPLNDQNHRIDYLLQTSSKCNLLTPPDDEQPSIFENLYDISAGTFDAAFMEPQLGLGSHNNDVAIDTYANESIMQGTLQGCESVALGSSVLNPFDKQSDNANKSCLSENAKSEQVDILQTNSMGMPDFH* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2961 816 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 255 327 IPR001739 GO:0003677
Ahy17g2961 816 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 4 380 - -
Ahy17g2961 816 MobiDBLite consensus disorder prediction 569 595 - -
Ahy17g2961 816 SUPERFAMILY DNA-binding domain 261 310 IPR016177 GO:0003677
Ahy17g2961 816 MobiDBLite consensus disorder prediction 174 211 - -
Ahy17g2961 816 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 4 380 IPR037472 -
Ahy17g2961 816 MobiDBLite consensus disorder prediction 367 387 - -
Ahy17g2961 816 Pfam Methyl-CpG binding domain 259 307 IPR001739 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2961 Ahy-Chr17 129742433 129747313 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2961 - - ahf:112706180 1484.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2961 17 129742433 129747313 Ahy17g2961 17 129742433 129747313 ECH
Ahy17g2961 17 129742433 129747313 Ahy8g0664 8 13077641 13082465 hybridization