Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2954 ATGCCACTACCACAGGACCTCACTCCCCACCAACAATCCCACTGTTTCCTCAATTTCCCTTCCGATTTCTCTTCCCTCACCGCGCCACCGCCCGGGGGATTGTTCCTCGAACCCGCAACTCCAGATTCCTTCCTCCGCCTGCTTCCCGCCGCCTCGATTCGTGCCGAATTGAATCCCTCGCCGCCACGCCGGAGGCTTAAGGCGGCAGTAGCTGCTAGCTGCTTCTTGTCGGTGAGCTTGCCGAGTGCTAAACTCGTGGTGCCGAATGGGGACAACGGCTCCGACAAGGAGACAAGTTCGGAGGAGGGTGTTGTTGAGGTACAACACAAGGTTAGGACGGTACGAGGAGGCAATGCCGTCAACAACACCACTAAGCATCTATGGGCTGGTGCCGTAGCTGCCATGGTTTCTAGAACTTGTGTTGCTCCACTTGAAAGACTTAAGCTGGAGTATATAGTTCGCGGGGAGAAGAAGAATATCGTTGAGCTTGTGAGAAAGATAGCCACTTCTCAGGGTCTGAGGGGCTTTTGGAAGGGGAACCTTGTAAATATTCTGCGGACGGCTCCATTCAAGGCAGTGAATTTTTGTGCTTATGATACATATAGGAAGCAGCTCCTTAGATTCTCCGGAAATGAGGAAACTACCAATTTTGAGAGGTTTATTGCTGGTGCTGCTGCTGGAATTACTGCTACCATTATTTGCCTTCCACTTGACACAATCCGGACCAAGTTGGTGGCACCTGGTGGGGAAGCTTTGGGTGGTGTTATTGGTGCTTTCCAATACATGATTCGGACTGAAGGCTTCTTTTCTCTCTACAAGGGTTTGGTACCGTCAATTATAAGTATGGCTCCTTCTGGTGCAGTTTTTTATGGTGTATATGATATACTCAAATCAGCTTATTTGCATTCACCCAAAGGAAGGAAGCGAATCCAGAATTTGCACAAACAGGGTAAGGAATTGAGTGCATTGGATCAGCTTGAGTTAGGACCAGTAAGGACGCTGTTGTATGGTGCTATTGCCGGTGCTTGTGCAGAAGCTGCTACATATCCATTCGAAGTGGTAAGGAGGCAGCTTCAATTGCAAGTCCAGTCTACCCGTTTAAGTTCTTTTGCAACTTGTGCCAAAATAGTGGAACATGGAGGCATTCAAGCTCTGTATGCAGGACTTATTCCCAGCTTACTCCAGGTACTTCCTTCAGCATCAATCAGTTACTTTGTCTATGAGTTCATGAAGATTGTTCTCAAAGTGGAGTAG 1254 0.4848 MPLPQDLTPHQQSHCFLNFPSDFSSLTAPPPGGLFLEPATPDSFLRLLPAASIRAELNPSPPRRRLKAAVAASCFLSVSLPSAKLVVPNGDNGSDKETSSEEGVVEVQHKVRTVRGGNAVNNTTKHLWAGAVAAMVSRTCVAPLERLKLEYIVRGEKKNIVELVRKIATSQGLRGFWKGNLVNILRTAPFKAVNFCAYDTYRKQLLRFSGNEETTNFERFIAGAAAGITATIICLPLDTIRTKLVAPGGEALGGVIGAFQYMIRTEGFFSLYKGLVPSIISMAPSGAVFYGVYDILKSAYLHSPKGRKRIQNLHKQGKELSALDQLELGPVRTLLYGAIAGACAEAATYPFEVVRRQLQLQVQSTRLSSFATCAKIVEHGGIQALYAGLIPSLLQVLPSASISYFVYEFMKIVLKVE* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2954 417 ProSiteProfiles Solute carrier (Solcar) repeat profile. 121 204 IPR018108 -
Ahy17g2954 417 ProSiteProfiles Solute carrier (Solcar) repeat profile. 214 299 IPR018108 -
Ahy17g2954 417 SUPERFAMILY Mitochondrial carrier 120 410 IPR023395 -
Ahy17g2954 417 Pfam Mitochondrial carrier protein 328 414 IPR018108 -
Ahy17g2954 417 Pfam Mitochondrial carrier protein 123 206 IPR018108 -
Ahy17g2954 417 Pfam Mitochondrial carrier protein 214 301 IPR018108 -
Ahy17g2954 417 Gene3D Mitochondrial carrier domain 118 416 IPR023395 -
Ahy17g2954 417 PANTHER SOLUTE CARRIER FAMILY 25 26 417 - -
Ahy17g2954 417 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 26 417 - -
Ahy17g2954 417 PRINTS Mitochondrial carrier protein signature 229 247 IPR002067 GO:0055085
Ahy17g2954 417 PRINTS Mitochondrial carrier protein signature 272 290 IPR002067 GO:0055085
Ahy17g2954 417 PRINTS Mitochondrial carrier protein signature 139 153 IPR002067 GO:0055085
Ahy17g2954 417 PRINTS Mitochondrial carrier protein signature 337 359 IPR002067 GO:0055085
Ahy17g2954 417 PRINTS Mitochondrial carrier protein signature 126 139 IPR002067 GO:0055085
Ahy17g2954 417 PRINTS Mitochondrial carrier protein signature 179 199 IPR002067 GO:0055085
Ahy17g2954 417 ProSiteProfiles Solute carrier (Solcar) repeat profile. 328 413 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2954 Ahy-Chr17 129586053 129589983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2954 32 396 Organic Solute Cotransporters AT5G64970 64.380 1.93e-161 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2954 - - gmx:100816623 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2954 17 129586053 129589983 Ahy17g2954 17 129586053 129589983 ECH
Ahy17g2954 17 129586053 129589983 Ahy8g0655 8 12931551 12935280 hybridization