Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2949 ATGGCGGGTGGCGGATTTGCGGTTGATACACCGGCCGGCAGCTTCGACGGCAGGGTGACACTCTCAGTTGTCATCACTTGCTTTGTTGCTGCATCCAGTGGCCTCATTTTTGGATATGACATCGGAGTTTCAGGAGGTGTGACAACAATGGTACCGTTTCTTGAGAAGTTCTTCCCAGACATACTGAGGAAGGCAGCTGGTACTAAAGTGAACTTGTACTGTGTGTATGACAGTCAAGTGCTTACTTTGTTCACGTCTTCTTTGTATCTGGCTGGCTTGATGTCGTCGCTCGTTGCAAGCCGAGTCACGGCCGCGCTTGGCCGCAGGATCACCATGATGATAGGTGGCGCCACCTTCCTTGTCGGCGGTGCTTTCAACGGAGGAGCTGAAAACATTGCCATGCTCATCTTGGGTCGTATCCTTCTCGGCTTTGGGGTTGGTTTCACTAATCAGGCAGCTCCACTGTACCTATCCGAAATCGCACCACCAAAATGGCGAGGCGCGTTTAATGCAGGGTTCCAATTCTTCTTGTCAATCGGAGTGGTGGTTGCGGGCTGCATCAACTACGGCACAGCCAAACACACTTGGGGGTGGCGCGTCTCCCTGGGGATCGCCATCGTCCCTGCCGCAGTCATCACCATTGGCTCCTTCCTCATAACCGACACCCCCAACAGTCTTGTCCAACGTGGCAAGATAGAGCAAGCAAGGAAGGCTCTTCGGCAAGTGAGAGGCTCCGAGACCGACGTGGAACCTGAGCTGAAAGAACTCATTAGGTGGTCTGAAATCGCGAAATCTGTGGAGAAGGAACCGTTTATGATGATATTTGAGAGGCAGTATCGCCCTCACTTGGTCATGGCCTTTTTAATACCTTCTTTTCAGCAGCTTACTGGTATCAACATCGTCGCTTTCTATTCTCCTAATCTCTTTCAATCTGTGGGTTTCGGACATGATGCTGCTTTGCTCTCTGCTATTATTCTTGGAGTTGTTAACCTTACCTCCATCCTCTTCTCTACTACTATTGTTGATCGCTTCGGTCGAAGGTTCTGTTTTATTTCTGGTGGCCTTGTCATGCTTTTTTGTCAGATTGCGTTGGCTGCATTGCTAGCTGCGGTGACGGGTGTTCACGGCACAAAGGACATATCGAGAGGCAGCGCCGTGATGGTACTTGTGCTGATGTGTGTCTACTCCGCCGGCTTCGGGTGGTCGTGGGGGCCTCTAGCGTTCCTGGTTCCAAGTGAGATCTTCCCATTGAAGATCAGAACCACCGGACAGAGCATAAACATCGCCATGGGATTCCTAACCATTTCCGTATTGTCGCAATCATTCTTGTCCATGCTTTGCCACTTCAAGTTCGCCGTCTTCTTGTTCTACGGCGGTTGGATCGCCATCATGACTCTCTTTATCTTCTTCTTCTTGCCGGAGACCAAACGGATCCCTCTTGAATCAATGTACACCATTTGGGGCAAGCATTGGTTTTGGCATCGCTATGTTACTAATGAAGAGTCTCGCCAATATGATAATAATATATGA 1530 0.5007 MAGGGFAVDTPAGSFDGRVTLSVVITCFVAASSGLIFGYDIGVSGGVTTMVPFLEKFFPDILRKAAGTKVNLYCVYDSQVLTLFTSSLYLAGLMSSLVASRVTAALGRRITMMIGGATFLVGGAFNGGAENIAMLILGRILLGFGVGFTNQAAPLYLSEIAPPKWRGAFNAGFQFFLSIGVVVAGCINYGTAKHTWGWRVSLGIAIVPAAVITIGSFLITDTPNSLVQRGKIEQARKALRQVRGSETDVEPELKELIRWSEIAKSVEKEPFMMIFERQYRPHLVMAFLIPSFQQLTGINIVAFYSPNLFQSVGFGHDAALLSAIILGVVNLTSILFSTTIVDRFGRRFCFISGGLVMLFCQIALAALLAAVTGVHGTKDISRGSAVMVLVLMCVYSAGFGWSWGPLAFLVPSEIFPLKIRTTGQSINIAMGFLTISVLSQSFLSMLCHFKFAVFLFYGGWIAIMTLFIFFFLPETKRIPLESMYTIWGKHWFWHRYVTNEESRQYDNNI* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2949 509 ProSiteProfiles Major facilitator superfamily (MFS) profile. 26 476 IPR020846 GO:0022857
Ahy17g2949 509 Pfam Sugar (and other) transporter 27 487 IPR005828 GO:0016021|GO:0022857|GO:0055085
Ahy17g2949 509 ProSitePatterns Sugar transport proteins signature 2. 141 166 IPR005829 GO:0016021|GO:0022857|GO:0055085
Ahy17g2949 509 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 12 501 - -
Ahy17g2949 509 TIGRFAM SP: MFS transporter, sugar porter (SP) family 23 482 IPR003663 GO:0016020|GO:0022857|GO:0055085
Ahy17g2949 509 SUPERFAMILY MFS general substrate transporter 28 482 IPR036259 -
Ahy17g2949 509 CDD MFS_STP 29 474 IPR044778 GO:0015145|GO:0015749
Ahy17g2949 509 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 12 501 IPR045262 GO:0015144
Ahy17g2949 509 Gene3D MFS general substrate transporter like domains 12 491 IPR036259 -
Ahy17g2949 509 PRINTS Sugar transporter signature 293 303 IPR003663 GO:0016020|GO:0022857|GO:0055085
Ahy17g2949 509 PRINTS Sugar transporter signature 34 44 IPR003663 GO:0016020|GO:0022857|GO:0055085
Ahy17g2949 509 PRINTS Sugar transporter signature 412 424 IPR003663 GO:0016020|GO:0022857|GO:0055085
Ahy17g2949 509 PRINTS Sugar transporter signature 136 155 IPR003663 GO:0016020|GO:0022857|GO:0055085
Ahy17g2949 509 PRINTS Sugar transporter signature 389 410 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2949 Ahy-Chr17 129489470 129493570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2949 50 496 Organic Solute Cotransporters AT1G34580 62.444 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2949 K24193 - gmx:100817692 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2949 17 129489470 129493570 Ahy17g2949 17 129489470 129493570 ECH
Ahy17g2949 17 129489470 129493570 Ahy8g0652 8 12871983 12875382 hybridization