Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2931 ATGACACTTTACGGTGACAGCATGGCCCTCTCACCACTACTCTTCACCGTGATCTCCTTCTTGCTCCTTTTCCGACTCCAGGCAACACCACCACCATTTGCTTGTGACTGGTCAAACCCTTCCACAAGATCTTACCCATTCTGCAATCCAAAGCTTCCAATCGCTCAGCGAGTCAGAGACCTCGTCTCAAGACTCACATTGGACGAGAAACTCTCCCAACTCGTCAACAAGGCCCCTCCCATTCCTCGCCTCGGTATCCCCCGCTACCAGTGGTGGAGCGAGGCACTCCACGGCGTTGCCGGCATTGGCGGCGGCATCTTCTTCAACGGCACTATCACTTCCGCCACCAGCTTCCCCCAAGTCATTCTCACCGCTGCCACTTTTGACTCCCACCTCTGGTACCGAATCGGTCACACGATCGGGATAGAAGCAAGAGCAATATACAATGCAGGGCAAGCAATAGGGATGACATTTTGGGCACCAAACATAAACATTTTTAGGGACCCGAGATGGGGCAGAGGACAAGAGACAGCTGGTGAAGACCCACTCATGACTTCTAAGTATGCTGTCTCCTACGTTAGAGGCCTTCAAGGTGACTCCTTTCAGGGTGGAACACTCAGAGGCCACTTACAAGCTTCTGCTTGTTGCAAGCATTTCACTGCTTATGATTTGGACAATTGGAAGGGCGTTAATCGCTTTGCCTTTGATGCTCGTGTAAGTTTGCAAGATCTAGCGGACACATACCAGCCTCCATTTAAGAGTTGCATAGAAGAAGGACATGCAAGTGGGATAATGTGTGCGTACAACCGTGTCAATGGGGTTCCAAATTGTGCTGATTACAATCTCTTAACCAACATTGCAAGAAAACAATGGGATTTCGATGGGTATATTACATCTGATTGTGGAGCAGTGAGCCTCTTACATGATGAACAAGGATATGCAAAATCACCAGAGGATGCTGTTTCCGATGTCCTTCGGGCAGGGATGGATGTGGAATGTGGAAGCTATTTGACAGAGCATGCTAAATCAGCAGTATTGAAGAAAAAGTTAGCTACATCTGAAATAGACCGCGCCCTTCACAATCTGTTCTCAATCAGAATGAGGTTAGGACTATTTGATGGAGATCCAAGCAAGCTCCCATTTGGGTTCATTGGACCCAACAACGTGTGTTCCAAGGAACACCGCTACTTAGCTCTCGAGGCAGCAAGAAACGGCATTGTCCTCTTGAAGAACCAACACTCCCTCCTCCCACTTCCTAAAACAAATCCTCCTATCTCCCTCGCCGTCATCGGCCCCAACGCCAATGCTTCCCCTCTAACACTTCTTGGAAACTATGCTGGCCCTCCCTGCAACCAACTCACATTGTTGCAGGGCTTCCAGCATTATGTTAAGGACACTCTCTACCACCCCGGATGCGACGGCGGCGCCAAGTGCCCTTTTGCCCACATTGACCAGGCTGTTCAACTTGCCAGCAAAGTGGATTATGTTGTCATGGTTATGGGGTTGGATCAGAGCCAGGAGAAGGAGGAGCGCGATCGCGTTCACCTTGACTTGCCCGGCAAGCAACTTGAACTCATCAATGCCGTCGCTAAAGCTTCTAAGAGGCCCGTTATTTTGGTGCTTCTCTGCGGAGGCCCGGTGGATATCTCTTCCGCCAAGTATAATAACAAAATTGGAGGAATTCTATGGGCTGGTTATCCCGGGGAACTTGGCGCCATTGCACTTGCTCAGATCATCTTTGGTGACCATAACCCAGGAGGAAGATTACCAATAACTTGGTACCCAAAAGATTACATAAAAGTACCAATGACAGACATGAGGATGCGTGCTGATCCTTCATCAGGCTACCCTGGTAGAACATATAGATTCTACACAGGTCCTAAGGTCTATGAATTTGGCTTTGGCCTAAGCTACACCAAATACTCCTATGAATTTGTTTCCGTCACGCGCGACAAGCTCCACTTCAGCCATTCATCCACTCATTTCATGCTACAAAACTCGTCAGAAACCTTGAGGTACAAGTTAGTCTCAGAGTTGAGCGAAGAAGCTTGCAAAAGCATGGCGGTTTCGGTGACTGTGGGAGTTCAGAACCATGGAAGCATGGTTGGGAAACATCCTGTGTTGCTGTTCTTGAAACATGGGAGACAGGGGAATGGGAATCCTATGAAACAGTTGGTTGGTTTTGAGAGTGTGTTGTTGGATGCAGGGGAAAAGGTTCATGTTGGATTTGAACTAAGTCCTTGTGAGCATATGAGTAGAGCAAATGAGGAAGGTTCATTGGTAATTGAAGAAGGATCTCATTTGTTGCTTGTAGGTGATGTTGAGTACCCAATTCATGTCATTGTCTGA 2349 0.4819 MTLYGDSMALSPLLFTVISFLLLFRLQATPPPFACDWSNPSTRSYPFCNPKLPIAQRVRDLVSRLTLDEKLSQLVNKAPPIPRLGIPRYQWWSEALHGVAGIGGGIFFNGTITSATSFPQVILTAATFDSHLWYRIGHTIGIEARAIYNAGQAIGMTFWAPNINIFRDPRWGRGQETAGEDPLMTSKYAVSYVRGLQGDSFQGGTLRGHLQASACCKHFTAYDLDNWKGVNRFAFDARVSLQDLADTYQPPFKSCIEEGHASGIMCAYNRVNGVPNCADYNLLTNIARKQWDFDGYITSDCGAVSLLHDEQGYAKSPEDAVSDVLRAGMDVECGSYLTEHAKSAVLKKKLATSEIDRALHNLFSIRMRLGLFDGDPSKLPFGFIGPNNVCSKEHRYLALEAARNGIVLLKNQHSLLPLPKTNPPISLAVIGPNANASPLTLLGNYAGPPCNQLTLLQGFQHYVKDTLYHPGCDGGAKCPFAHIDQAVQLASKVDYVVMVMGLDQSQEKEERDRVHLDLPGKQLELINAVAKASKRPVILVLLCGGPVDISSAKYNNKIGGILWAGYPGELGAIALAQIIFGDHNPGGRLPITWYPKDYIKVPMTDMRMRADPSSGYPGRTYRFYTGPKVYEFGFGLSYTKYSYEFVSVTRDKLHFSHSSTHFMLQNSSETLRYKLVSELSEEACKSMAVSVTVGVQNHGSMVGKHPVLLFLKHGRQGNGNPMKQLVGFESVLLDAGEKVHVGFELSPCEHMSRANEEGSLVIEEGSHLLLVGDVEYPIHVIV* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2931 782 Gene3D - 391 639 IPR036881 GO:0004553|GO:0005975
Ahy17g2931 782 Gene3D Immunoglobulins 665 780 IPR013783 -
Ahy17g2931 782 PANTHER SUGAR HYDROLASE-RELATED 17 781 IPR044993 GO:0009044|GO:0045493
Ahy17g2931 782 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 406 641 IPR036881 GO:0004553|GO:0005975
Ahy17g2931 782 Pfam Glycosyl hydrolase family 3 C-terminal domain 406 638 IPR002772 GO:0004553|GO:0005975
Ahy17g2931 782 PRINTS Glycosyl hydrolase family 3 signature 286 304 IPR001764 GO:0004553|GO:0005975
Ahy17g2931 782 PRINTS Glycosyl hydrolase family 3 signature 212 228 IPR001764 GO:0004553|GO:0005975
Ahy17g2931 782 PRINTS Glycosyl hydrolase family 3 signature 118 137 IPR001764 GO:0004553|GO:0005975
Ahy17g2931 782 PANTHER GLYCOSIDE HYDROLASE FAMILY 3 PROTEIN 17 781 - -
Ahy17g2931 782 Gene3D - 57 379 IPR036962 GO:0004553|GO:0005975
Ahy17g2931 782 SMART Fn3_like_2 705 775 IPR026891 -
Ahy17g2931 782 Pfam Fibronectin type III-like domain 707 773 IPR026891 -
Ahy17g2931 782 SUPERFAMILY (Trans)glycosidases 45 404 IPR017853 -
Ahy17g2931 782 Pfam Glycosyl hydrolase family 3 N terminal domain 111 362 IPR001764 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2931 Ahy-Chr17 129156086 129165052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2931 21 782 Glycoside Hydrolase AT1G78060 64.837 0.0 1026
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2931 - - aprc:113867121 1303.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2931 17 129156086 129165052 Ahy17g2931 17 129156086 129165052 ECH
Ahy17g2931 17 129156086 129165052 Ahy8g0638 8 12550676 12560968 hybridization
Ahy17g2931 17 129156086 129165052 Ahy17g2931 17 129156086 129165052 PCT
Ahy17g2931 17 129156086 129165052 Ahy8g0638 8 12550676 12560968 PCT
Ahy8g0638 8 12550676 12560968 Ahy17g2931 17 129156086 129165052 PCT