LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy17g2929	ATGCTTCAGATAATGGCTGCTGAAGTGTATCGCCATGCTATTGGGACTTTTCAGTCTCATTCTTATGCCAACAATGTTAATCATAAGCAGAGGCTCAGGAACAATTTTGTGAGATTGGTGAATAAGGATTCTGTGAGTAGCAGAGGAGCTAGGTATTCTAGCTGCAGTAACCGTCGCAGTGTTATTCGATCTTCGGCTTCTCAAACATCGGTGGCAGATCCAGTTTCATTATCCCCTTCAAGAACACCCACCACTGACACTAACAAGAAATCAAATGAAGCGGCTTTGATCCTCATTCGGCATGGTGAGTCGCTGTGGAATGAAAAGAACTTATTCACAGGTTGTGTTGATGTTCCACTAAGCAAGAAGGGAATAGATGAGGCAATAGAAGCTGGCAAAAGAATTAGCAGCATTCCAGTTGATGTGATATTTACATCTGCTTTGATTCGGGCACAAATGACTGCCATGCTTGCCATGACCCAGCATCGTCGTAAGAAGGTGCCTATCATCATTCATAATGAAAGTGAACAAGCAAGGCAATGGAGTCAAGTTTTTAGTGAAGACACTAAAAAACAGTCTATACCAGTCATAGCATCATGGCAATTAAATGAAAGAATGTATGGGGAACTACAGGGTCTCAATAAACAAGAAACAGCTGACAGATATGGAAAAGAGCAAGTCCATGAGTGGCGCAGAAGCTATGACACACCTCCTCCCAATGGAGAAAGTTTGGAAATGTGTGCTGAAAGAGCAGTTGCCTATTTTAGAGACCAAATTGAACCTCAACTTTTATCCGGAAAGAATGTTATGATCGCTGCCCACGGAAACTCCCTGAGATCCATTATCATGTATCTCGACAAGTTAACTTCCCAAGAGGTCATTAGTTTGGAACTGTCAACTGGAATTCCAATGCTATATATTTTCAAAGAGGGAAGATTCATTAGGAGGGGGAGTCCCATAGGACCACAGGAAGCTGGGGTTTATGCTTACACCAAGCGATTGGCTCTTTACAGACAGAAGTTGGATGAGATGTTCTAA	1038	0.4239	MLQIMAAEVYRHAIGTFQSHSYANNVNHKQRLRNNFVRLVNKDSVSSRGARYSSCSNRRSVIRSSASQTSVADPVSLSPSRTPTTDTNKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKRISSIPVDVIFTSALIRAQMTAMLAMTQHRRKKVPIIIHNESEQARQWSQVFSEDTKKQSIPVIASWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDTPPPNGESLEMCAERAVAYFRDQIEPQLLSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPIGPQEAGVYAYTKRLALYRQKLDEMF*	346

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy17g2929	345	CDD	HP_PGM_like	96	315	IPR013078	-
	Ahy17g2929	345	PANTHER	PHOSPHOGLYCERATE MUTASE	4	344	IPR005952	GO:0004619\|GO:0006096\|GO:0016868
	Ahy17g2929	345	Hamap	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA].	93	320	IPR005952	GO:0004619\|GO:0006096\|GO:0016868
	Ahy17g2929	345	PANTHER	PHOSPHOGLYCERATE MUTASE 1, HISTIDINE PHOSPHATASE SUPERFAMILY-RELATED	4	344	-	-
	Ahy17g2929	345	MobiDBLite	consensus disorder prediction	59	89	-	-
	Ahy17g2929	345	SUPERFAMILY	Phosphoglycerate mutase-like	96	312	IPR029033	-
	Ahy17g2929	345	ProSitePatterns	Phosphoglycerate mutase family phosphohistidine signature.	98	107	IPR001345	GO:0003824
	Ahy17g2929	345	SMART	PGAM_5	95	281	IPR013078	-
	Ahy17g2929	345	Gene3D	-	85	316	IPR029033	-
	Ahy17g2929	345	Pfam	Histidine phosphatase superfamily (branch 1)	179	299	IPR013078	-
	Ahy17g2929	345	Pfam	Histidine phosphatase superfamily (branch 1)	96	172	IPR013078	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy17g2929	Ahy-Chr17	129147147	129150943	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy17g2929	K01834		-	gmx:100802621	574.318

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy17g2929	17	129147147	129150943	Ahy17g2929	17	129147147	129150943	ECH
	Ahy17g2929	17	129147147	129150943	Ahy8g0636	8	12542250	12546065	hybridization
	Ahy17g2929	17	129147147	129150943	Ahy17g2929	17	129147147	129150943	PCT
	Ahy17g2929	17	129147147	129150943	Ahy8g0636	8	12542250	12546065	PCT
	Ahy8g0636	8	12542250	12546065	Ahy17g2929	17	129147147	129150943	PCT