Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2902 ATGGCGGCGGAAGGAGGTTCCGATCAATTCATCGACATCGTTAAGCTCTCTCCTCCGGCAAAGTTCCCGGCGGCATTCCCCGAGGACCTCAAGGTGGCTCCCTCCTTGAAGCGCCGCCGTTCTGGCGGTGACACGTGGGTGGTGTCAGTGTTCGTGATCATCCACGTGGGCGTCTTCATCGCAACGATGCTGGTCAATGATTGCTGGACGAACTCCAACGGCGACTGCGCCCTAAAAACCCTCGGAAGGTTCTCCTTCCAACCTCTCTCTGAGAATCCTCTCTTAGGCCCTTCTCAGTCCAAATTAGAGGAAATGGGAGCGCTTCGGAGGAATTTCGTGACAGAGTATCACCAAACTTGGCGTCTTTTCACCTCTCCATTTCTTCATGCTGGGCTCTTCCACCTCCTCCTCAATCTCTGCAGTATCATCTTCATCGGAATTCACCTAGAGCGCGAGCTTGGACCGTTACGGATTGGTGTAATCTATGCAATGTCTGCATTTGGGGGAGCCTTGATGGCTTCTCTTTTTCTTCAGCATACCCCAGCTGTTGCCTCTTCTGGGGCTTTGTATGGATTACTCGGAACTTTACTCTCTGAGCTCATTTGGAACTGGGAATTACAAACCAAAAGGGTTTCAGCAATAGTCTCTTTTGTCTTTGTATTTGTTTGCAATTTCATCATTGGCTTTCTGCCTTATGTGGACAACTTTGCGAGCATTGGAGGTTTTGTATCAGGGTTCCTTCTTGGATCTGTACTTCTACTCAGCAGAAAGCTTGAACTGCCAAAGGTTCCAATCAAAGGAACTCTCTTTGATTATGGTGTCAAGAGTTACATCAAGTTAAAGTTGAAGCAAAACCTGGACAGACCGGTTCTCAGGATTGTTTCTTTTATCCTCTTTAGCCTGATATTGGCCGGTTGTCTTGTGGCAGTTCTTCACGGGATCAACATCAATAGTTATTGCACATGGTGCCCATATGTTGACTGTATCCCTTATACAAGCTGGCACTGCCAAAATGGAGAAACCTCTTGTAAGACAATGGTGAGCGATGATCAGATGACATTGACCTGTATGGGGAATGGAAACTTCAGGGTCTTTCCTTTTACGAACATCTCTCGGACAAGGATCAGTGATCTATGCAATCTGATATGCTGA 1152 0.474 MAAEGGSDQFIDIVKLSPPAKFPAAFPEDLKVAPSLKRRRSGGDTWVVSVFVIIHVGVFIATMLVNDCWTNSNGDCALKTLGRFSFQPLSENPLLGPSQSKLEEMGALRRNFVTEYHQTWRLFTSPFLHAGLFHLLLNLCSIIFIGIHLERELGPLRIGVIYAMSAFGGALMASLFLQHTPAVASSGALYGLLGTLLSELIWNWELQTKRVSAIVSFVFVFVCNFIIGFLPYVDNFASIGGFVSGFLLGSVLLLSRKLELPKVPIKGTLFDYGVKSYIKLKLKQNLDRPVLRIVSFILFSLILAGCLVAVLHGININSYCTWCPYVDCIPYTSWHCQNGETSCKTMVSDDQMTLTCMGNGNFRVFPFTNISRTRISDLCNLIC* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2902 383 SUPERFAMILY Rhomboid-like 45 257 IPR035952 -
Ahy17g2902 383 PANTHER RHOMBOID-LIKE PROTEIN 8 38 383 - -
Ahy17g2902 383 Pfam Rhomboid family 115 254 IPR022764 GO:0004252|GO:0016021
Ahy17g2902 383 Gene3D - 42 260 IPR035952 -
Ahy17g2902 383 PANTHER RHOMBOID-RELATED 38 383 IPR002610 GO:0004252|GO:0006508|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2902 Ahy-Chr17 128635165 128637864 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2902 - - gmx:100775875 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2902 17 128635165 128637864 Ahy17g2902 17 128635165 128637864 ECH
Ahy17g2902 17 128635165 128637864 Ahy8g0615 8 12016896 12019661 hybridization